RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ANGEL2Q5VTE6 544 aaKnown RBP6.59□□□□□ -1.36
CCDC54-201ENST00000261058 ZNF574Q6ZN55 896 aaPredicted RBP6.59□□□□□ -1.36
CCDC54-201ENST00000261058 FRS2Q8WU20 508 aa6.59□□□□□ -1.36
CCDC54-201ENST00000261058 KCTD13Q8WZ19 329 aa6.59□□□□□ -1.36
CCDC54-201ENST00000261058 ZFP64Q9NPA5 681 aa6.59□□□□□ -1.36
CCDC54-201ENST00000261058 PAK6Q9NQU5 681 aaPredicted RBP6.59□□□□□ -1.36
CCDC54-201ENST00000261058 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.36
CCDC54-201ENST00000261058 NPFFR2Q9Y5X5 522 aa6.59□□□□□ -1.36
CCDC54-201ENST00000261058 ARNTLO00327 626 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 ADAMTS4O75173 837 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 SNRPB2P08579 225 aaKnown RBP6.58□□□□□ -1.36
CCDC54-201ENST00000261058 SSTR4P31391 388 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 SUMO1P63165 101 aaKnown RBP6.58□□□□□ -1.36
CCDC54-201ENST00000261058 IKZF1Q13422 519 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 TRIM61Q5EBN2 209 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 TMEM52Q8NDY8 209 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 LINC01599Q8WXQ3 324 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 FCRL2Q96LA5 508 aaPredicted RBP6.58□□□□□ -1.36
CCDC54-201ENST00000261058 CDC6Q99741 560 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 CARS2Q9HA77 564 aaKnown RBP6.58□□□□□ -1.36
CCDC54-201ENST00000261058 NCOA5Q9HCD5 579 aaKnown RBP6.58□□□□□ -1.36
CCDC54-201ENST00000261058 CWC22Q9HCG8 908 aaKnown RBP6.58□□□□□ -1.36
CCDC54-201ENST00000261058 ERVK13-1Q9NX77 482 aa6.58□□□□□ -1.36
CCDC54-201ENST00000261058 GSTM1P09488 218 aa6.57□□□□□ -1.36
CCDC54-201ENST00000261058 FUT4P22083 530 aa6.57□□□□□ -1.36
CCDC54-201ENST00000261058 TCEA2Q15560 299 aa6.57□□□□□ -1.36
CCDC54-201ENST00000261058 PRSS53Q2L4Q9 553 aa6.57□□□□□ -1.36
CCDC54-201ENST00000261058 TKFCQ3LXA3 575 aa6.57□□□□□ -1.36
CCDC54-201ENST00000261058 E4F1Q66K89 784 aaPredicted RBP6.57□□□□□ -1.36
CCDC54-201ENST00000261058 FEZ1Q99689 392 aa6.57□□□□□ -1.36
CCDC54-201ENST00000261058 MRPL4Q9BYD3 311 aaKnown RBP6.57□□□□□ -1.36
CCDC54-201ENST00000261058 EBF1Q9UH73 591 aa6.57□□□□□ -1.36
CCDC54-201ENST00000261058 BTBD11A6QL63 1104 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 PLD2O14939 933 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 RFPL3O75679 317 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 ZGLP1P0C6A0 271 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 ZP2Q05996 745 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 LRP8Q14114 963 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 CYP2R1Q6VVX0 501 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 ZPBP2Q6X784 338 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 CCDC103Q8IW40 242 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 PTCHD1Q96NR3 888 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 ALPK1Q96QP1 1244 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 MMP19Q99542 508 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 GPRC5CQ9NQ84 441 aa6.56□□□□□ -1.36
CCDC54-201ENST00000261058 SSU72P8A0A1W2PR75 194 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 PPP1R12AO14974 1030 aaPredicted RBP6.55□□□□□ -1.36
CCDC54-201ENST00000261058 FKTNO75072 461 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 ASMTLO95671 621 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 ECI1P42126 302 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 SEPHS1P49903 392 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 FNDC3BQ53EP0 1204 aaKnown RBP6.55□□□□□ -1.36
CCDC54-201ENST00000261058 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 STYK1Q6J9G0 422 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 SLC23A3Q6PIS1 610 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 RSPO2Q6UXX9 243 aaPredicted RBP6.55□□□□□ -1.36
CCDC54-201ENST00000261058 WAPLQ7Z5K2 1190 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 NBPF11Q86T75 865 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 GSTCDQ8NEC7 633 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 MAP6Q96JE9 813 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 CDADC1Q9BWV3 514 aa6.55□□□□□ -1.36
CCDC54-201ENST00000261058 TMEFF2Q9UIK5 374 aaPredicted RBP6.55□□□□□ -1.36
CCDC54-201ENST00000261058 TRBV23OR9-2A0A075B6M9 112 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 PLS3P13797 630 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 RPL10P27635 214 aaKnown RBP6.54□□□□□ -1.36
CCDC54-201ENST00000261058 KCNJ6P48051 423 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 RALGPS1Q5JS13 557 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 KSR1Q8IVT5 923 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 FLCNQ8NFG4 579 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 PTPRN2Q92932 1015 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 C19orf73Q9NVV2 129 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 TNFRSF10DQ9UBN6 386 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 TMEM59LQ9UK28 342 aa6.54□□□□□ -1.36
CCDC54-201ENST00000261058 FADS2P1A8MWK0 482 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 KIR2DL1P43626 348 aaPredicted RBP6.53□□□□□ -1.36
CCDC54-201ENST00000261058 KIR2DL2P43627 348 aaPredicted RBP6.53□□□□□ -1.36
CCDC54-201ENST00000261058 GABREP78334 506 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 KCNAB2Q13303 367 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 CBX2Q14781 532 aaPredicted RBP6.53□□□□□ -1.36
CCDC54-201ENST00000261058 DALRD3Q5D0E6 543 aaKnown RBP6.53□□□□□ -1.36
CCDC54-201ENST00000261058 MBLAC2Q68D91 279 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 IQCEQ6IPM2 695 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 ZNF662Q6ZS27 426 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 MAMDC2Q7Z304 686 aaPredicted RBP6.53□□□□□ -1.36
CCDC54-201ENST00000261058 PPIL6Q8IXY8 311 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 DCAF4Q8WV16 495 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 HHIPL1Q96JK4 782 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 IPO9Q96P70 1041 aaKnown RBP6.53□□□□□ -1.36
CCDC54-201ENST00000261058 ADAMTS10Q9H324 1103 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 SP110Q9HB58 689 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 CLEC1BQ9P126 229 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 ADAMTS6Q9UKP5 1117 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 ANGEL1Q9UNK9 670 aaKnown RBP6.53□□□□□ -1.36
CCDC54-201ENST00000261058 PLAAQ9Y263 795 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 CD2APQ9Y5K6 639 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 SBNO2Q9Y2G9 1366 aa6.53□□□□□ -1.36
CCDC54-201ENST00000261058 HYAL3O43820 417 aaPredicted RBP6.52□□□□□ -1.37
CCDC54-201ENST00000261058 WNT11O96014 354 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 PAMP19021 973 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 DUSP4Q13115 394 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms