RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ABCB6Q9NP58 842 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 L1RE1Q9UN81 338 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 LEMD3Q9Y2U8 911 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 GNPATO15228 680 aa17.08■□□□□ 0.32
DDX56-201ENST00000258772 ST5P78524 1137 aa17.08■□□□□ 0.32
DDX56-201ENST00000258772 TXNRD1Q16881 649 aa17.08■□□□□ 0.32
DDX56-201ENST00000258772 CSGALNACT2Q8N6G5 542 aa17.08■□□□□ 0.32
DDX56-201ENST00000258772 SPZ1Q9BXG8 430 aa17.08■□□□□ 0.32
DDX56-201ENST00000258772 TRIM9Q9C026 710 aa17.08■□□□□ 0.32
DDX56-201ENST00000258772 CPVLQ9H3G5 476 aa17.08■□□□□ 0.32
DDX56-201ENST00000258772 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 B4DLN1 442 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 CCNT1O60563 726 aaKnown RBP17.07■□□□□ 0.32
DDX56-201ENST00000258772 LDHCP07864 332 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 OR52Z1P0C646 297 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 CCNE1P24864 410 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 NAPAP54920 295 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 FAM98CQ17RN3 349 aaKnown RBP17.07■□□□□ 0.32
DDX56-201ENST00000258772 LETM2Q2VYF4 491 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 KRT25Q7Z3Z0 450 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 MAPKAPK5Q8IW41 473 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 P2RX5Q93086 422 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 EXOC1Q9NV70 894 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 SAP30BPQ9UHR5 308 aaKnown RBP17.07■□□□□ 0.32
DDX56-201ENST00000258772 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 H3BQF6 201 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 PSMD14O00487 310 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 HERVK_113P62684 666 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 VSNL1P62760 191 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 PDE4DQ08499 809 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 NONOQ15233 471 aaKnown RBP eCLIP17.07■□□□□ 0.32
DDX56-201ENST00000258772 MEA1Q16626 185 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 TRAPPC11Q7Z392 1133 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 NOA1Q8NC60 698 aaKnown RBP17.07■□□□□ 0.32
DDX56-201ENST00000258772 NUP58Q9BVL2 599 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 TTYH3Q9C0H2 523 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
DDX56-201ENST00000258772 BICDL2A1A5D9 508 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 SMCO2A6NFE2 343 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 RASSF10A6NK89 507 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 TUBBP07437 444 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 TBC1D8BQ0IIM8 1120 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 STK4Q13043 487 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 MCM6Q14566 821 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 MSL3Q8N5Y2 521 aaKnown RBP17.06■□□□□ 0.32
DDX56-201ENST00000258772 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
DDX56-201ENST00000258772 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
DDX56-201ENST00000258772 GNA11P29992 359 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 KRT83P78385 493 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 NFIXQ14938 502 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 CCDC122Q5T0U0 273 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 ZNF662Q6ZS27 426 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 RETREG2Q8NC44 543 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 TRIM21P19474 475 aaKnown RBP17.05■□□□□ 0.32
DDX56-201ENST00000258772 CDK8P49336 464 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 GPS2Q13227 327 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 GRAPQ13588 217 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 GRAPLQ8TC17 118 aaPredicted RBP17.05■□□□□ 0.32
DDX56-201ENST00000258772 ARHGEF1Q92888 912 aaKnown RBP17.05■□□□□ 0.32
DDX56-201ENST00000258772 EYA3Q99504 573 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 RTFDC1Q9BY42 306 aaPredicted RBP17.05■□□□□ 0.32
DDX56-201ENST00000258772 SUGCTQ9HAC7 445 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 PDE11AQ9HCR9 933 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 ADAM21Q9UKJ8 722 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 TFR2Q9UP52 801 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 RTCBQ9Y3I0 505 aaKnown RBP17.05■□□□□ 0.32
DDX56-201ENST00000258772 CDK5RAP2Q96SN8 1893 aa17.05■□□□□ 0.32
DDX56-201ENST00000258772 ENC1O14682 589 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 FCER1AP12319 257 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 TECP42680 631 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 ASIC1P78348 528 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 ZNF804AQ7Z570 1209 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 NEK8Q86SG6 692 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 TXLNBQ8N3L3 684 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 NEK11Q8NG66 645 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 NEDD1Q8NHV4 660 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
DDX56-201ENST00000258772 GBP3Q9H0R5 595 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 CYLC1P35663 651 aaPredicted RBP17.04■□□□□ 0.32
DDX56-201ENST00000258772 PPP1R2P41236 205 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 KLK7P49862 253 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 GYS2P54840 703 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 ZBED6P86452 979 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 AMPD3Q01432 767 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 USP17L2Q6R6M4 530 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 C16orf86Q6ZW13 317 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 RRP36Q96EU6 259 aaKnown RBP17.04■□□□□ 0.32
DDX56-201ENST00000258772 MMTAG2Q9BU76 263 aaKnown RBP17.04■□□□□ 0.32
DDX56-201ENST00000258772 ZNHIT6Q9NWK9 470 aaKnown RBP17.04■□□□□ 0.32
DDX56-201ENST00000258772 HDAC6Q9UBN7 1215 aa17.04■□□□□ 0.32
DDX56-201ENST00000258772 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms