RNA–Protein interactions for RNA: ENST00000244546.4

PEX6-201, Transcript of peroxisomal biogenesis factor 6, humanhuman

TSL 1 (best) BASIC

Gene PEX6, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX6-201ENST00000244546 NSUN4Q96CB9 384 aaKnown RBP22.58■■□□□ 1.2
PEX6-201ENST00000244546 SLC26A6Q9BXS9 759 aa22.58■■□□□ 1.2
PEX6-201ENST00000244546 VPS16Q9H269 839 aa22.58■■□□□ 1.2
PEX6-201ENST00000244546 LY9Q9HBG7 655 aa22.58■■□□□ 1.2
PEX6-201ENST00000244546 ZNF219Q9P2Y4 722 aaPredicted RBP22.58■■□□□ 1.2
PEX6-201ENST00000244546 LAMB2P55268 1798 aa22.58■■□□□ 1.2
PEX6-201ENST00000244546 BTBD18B2RXH4 712 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 KRT9P35527 623 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 EPN1Q9Y6I3 576 aaPredicted RBP22.57■■□□□ 1.2
PEX6-201ENST00000244546 CASZ1Q86V15 1759 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 USP17L12C9JPN9 530 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 USP17L21D6R901 530 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 GOLGA8KD6RF30 607 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 RIMBP2O15034 1052 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 ACTN4O43707 911 aaKnown RBP22.57■■□□□ 1.2
PEX6-201ENST00000244546 UFL1O94874 794 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 NDUFA10O95299 355 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 IARSP41252 1262 aaKnown RBP22.57■■□□□ 1.2
PEX6-201ENST00000244546 GRAPQ13588 217 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 KIRREL3Q8IZU9 778 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 TSEN2Q8NCE0 465 aaKnown RBP22.57■■□□□ 1.2
PEX6-201ENST00000244546 GRAPLQ8TC17 118 aaPredicted RBP22.57■■□□□ 1.2
PEX6-201ENST00000244546 SCN7AQ01118 1682 aa22.57■■□□□ 1.2
PEX6-201ENST00000244546 CEP57Q86XR8 500 aa22.56■■□□□ 1.2
PEX6-201ENST00000244546 TRIML1Q8N9V2 468 aa22.56■■□□□ 1.2
PEX6-201ENST00000244546 FAM217BQ9NTX9 383 aaPredicted RBP22.56■■□□□ 1.2
PEX6-201ENST00000244546 MTMR7Q9Y216 660 aa22.56■■□□□ 1.2
PEX6-201ENST00000244546 TAF1LQ8IZX4 1826 aa22.56■■□□□ 1.2
PEX6-201ENST00000244546 BAZ2BQ9UIF8 2168 aaKnown RBP22.56■■□□□ 1.2
PEX6-201ENST00000244546 N4BP3O15049 544 aa22.56■■□□□ 1.2
PEX6-201ENST00000244546 CUL4BQ13620 913 aa22.56■■□□□ 1.2
PEX6-201ENST00000244546 CCDC122Q5T0U0 273 aa22.56■■□□□ 1.2
PEX6-201ENST00000244546 IQCA1Q86XH1 822 aa22.56■■□□□ 1.2
PEX6-201ENST00000244546 TACO1Q9BSH4 297 aaKnown RBP22.56■■□□□ 1.2
PEX6-201ENST00000244546 FBXO2Q9UK22 296 aaPredicted RBP22.56■■□□□ 1.2
PEX6-201ENST00000244546 PPP1R12AO14974 1030 aaPredicted RBP22.55■■□□□ 1.2
PEX6-201ENST00000244546 TOB1P50616 345 aaPredicted RBP22.55■■□□□ 1.2
PEX6-201ENST00000244546 FAM47AQ5JRC9 791 aa22.55■■□□□ 1.2
PEX6-201ENST00000244546 PAPD7Q5XG87 772 aaKnown RBP22.55■■□□□ 1.2
PEX6-201ENST00000244546 EGFL6Q8IUX8 553 aa22.55■■□□□ 1.2
PEX6-201ENST00000244546 CTAGE1Q96RT6 745 aa22.55■■□□□ 1.2
PEX6-201ENST00000244546 DMGDHQ9UI17 866 aaKnown RBP22.55■■□□□ 1.2
PEX6-201ENST00000244546 CICQ96RK0 1608 aaPredicted RBP22.55■■□□□ 1.2
PEX6-201ENST00000244546 GUCY1A3Q02108 690 aa22.55■■□□□ 1.2
PEX6-201ENST00000244546 NTRK3Q16288 839 aa22.55■■□□□ 1.2
PEX6-201ENST00000244546 CCDC40Q4G0X9 1142 aa22.55■■□□□ 1.2
PEX6-201ENST00000244546 NAA35Q5VZE5 725 aa22.55■■□□□ 1.2
PEX6-201ENST00000244546 ELOA2Q8IYF1 753 aaPredicted RBP22.55■■□□□ 1.2
PEX6-201ENST00000244546 SLC12A7Q9Y666 1083 aa22.55■■□□□ 1.2
PEX6-201ENST00000244546 BAZ2AQ9UIF9 1905 aaKnown RBP22.55■■□□□ 1.2
PEX6-201ENST00000244546 GOLGA8AA7E2F4 631 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 ZBTB43O43298 467 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 SLC7A5Q01650 507 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 KRT31Q15323 416 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 CEP85LQ5SZL2 805 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 NAIF1Q69YI7 327 aaPredicted RBP22.54■■□□□ 1.2
PEX6-201ENST00000244546 DZIP1Q86YF9 867 aaKnown RBP22.54■■□□□ 1.2
PEX6-201ENST00000244546 CCDC13Q8IYE1 715 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 ANKRD2Q9GZV1 360 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 C4AP0C0L4 1744 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 ATXN2Q99700 1313 aaKnown RBP22.54■■□□□ 1.2
PEX6-201ENST00000244546 SSBP05455 408 aaKnown RBP eCLIP22.54■■□□□ 1.2
PEX6-201ENST00000244546 PDHBP11177 359 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 GCFC2P16383 781 aaKnown RBP22.54■■□□□ 1.2
PEX6-201ENST00000244546 NAP1L1P55209 391 aaKnown RBP22.54■■□□□ 1.2
PEX6-201ENST00000244546 SKOR1P84550 965 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 PPARDQ03181 441 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 DPYDQ12882 1025 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 TRIM29Q14134 588 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 TICAM2Q86XR7 235 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 TAB2Q9NYJ8 693 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 C6orf229H3BNL8 230 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 HERVK_113P62684 666 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 CKAP4Q07065 602 aaKnown RBP22.54■■□□□ 1.2
PEX6-201ENST00000244546 SPATA20Q8TB22 786 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 VCPKMTQ9H867 229 aa22.54■■□□□ 1.2
PEX6-201ENST00000244546 BRWD3Q6RI45 1802 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 KRT14P02533 472 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 SEC24CP53992 1094 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 APBA1Q02410 837 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 SF3B2Q13435 895 aaKnown RBP22.53■■□□□ 1.2
PEX6-201ENST00000244546 COL23A1Q86Y22 540 aaPredicted RBP22.53■■□□□ 1.2
PEX6-201ENST00000244546 LRRC1Q9BTT6 524 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 ITIH6Q6UXX5 1313 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 F8W031 263 aaPredicted RBP22.53■■□□□ 1.2
PEX6-201ENST00000244546 RASSF9O75901 435 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 USP17L8P0C7I0 530 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 PTPREP23469 700 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 IFT88Q13099 833 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 SGSM3Q96HU1 749 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 RNPC3Q96LT9 517 aaKnown RBP22.53■■□□□ 1.2
PEX6-201ENST00000244546 SLC40A1Q9NP59 571 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 JADE2Q9NQC1 790 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 DDX20Q9UHI6 824 aaKnown RBP22.53■■□□□ 1.2
PEX6-201ENST00000244546 CTNND2Q9UQB3 1225 aa22.53■■□□□ 1.2
PEX6-201ENST00000244546 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.53■■□□□ 1.2
PEX6-201ENST00000244546 MYH13Q9UKX3 1938 aa22.52■■□□□ 1.2
PEX6-201ENST00000244546 OPA1O60313 960 aa22.52■■□□□ 1.2
PEX6-201ENST00000244546 MATR3P43243 847 aaKnown RBP eCLIP22.52■■□□□ 1.2
PEX6-201ENST00000244546 NR5A1Q13285 461 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms