RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MAGED2Q9UNF1 606 aaPredicted RBP14.5□□□□□ -0.09
COL1A1-201ENST00000225964 MAD1L1Q9Y6D9 718 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 PLEKHG3A1L390 1219 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 IGSF3O75054 1194 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 TTLL7Q6ZT98 887 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 PHLDB2Q86SQ0 1253 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 PPP1R16BQ96T49 567 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 SLC39A2Q9NP94 309 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 ATP5JP18859 108 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 LMNB1P20700 586 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 KRT71Q3SY84 523 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 KIAA1841Q6NSI8 718 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 TTC30AQ86WT1 665 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 NLRP7Q8WX94 980 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 RABGAP1Q9Y3P9 1069 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 GADD45BO75293 160 aaPredicted RBP14.49□□□□□ -0.09
COL1A1-201ENST00000225964 CYP4A11Q02928 519 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 TSNAXIP1Q2TAA8 658 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 RAPH1Q70E73 1250 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 KCTD1Q719H9 257 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 ZNF577Q9BSK1 485 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 ZNF804BA4D1E1 1349 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 THAP12O43422 761 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 CLCN1P35523 988 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 DDX27Q96GQ7 796 aaKnown RBP14.49□□□□□ -0.09
COL1A1-201ENST00000225964 MED23Q9ULK4 1368 aa14.49□□□□□ -0.09
COL1A1-201ENST00000225964 BFSP1Q12934 665 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.48□□□□□ -0.09
COL1A1-201ENST00000225964 ARMCX3Q9UH62 379 aaPredicted RBP14.48□□□□□ -0.09
COL1A1-201ENST00000225964 IL1RL1Q01638 556 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 RSRC2Q7L4I2 434 aaKnown RBP14.48□□□□□ -0.09
COL1A1-201ENST00000225964 STK25O00506 426 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 SCG2P13521 617 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 LRCH2Q5VUJ6 765 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 ABCF3Q9NUQ8 709 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 COL4A3BPQ9Y5P4 624 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 TNKSO95271 1327 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 DDAH1O94760 285 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 ATF2P15336 505 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 RFC1P35251 1148 aaPredicted RBP14.48□□□□□ -0.09
COL1A1-201ENST00000225964 PPFIA1Q13136 1202 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 ELF2Q15723 593 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 IQCDQ96DY2 449 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 BCAP29Q9UHQ4 241 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 RNF8O76064 485 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 HEXIM1O94992 359 aaKnown RBP14.48□□□□□ -0.09
COL1A1-201ENST00000225964 LRRC43Q8N309 656 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 PNMA2Q9UL42 364 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 PHKG2P15735 406 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 RXRBP28702 533 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 INPP5BP32019 993 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 BBS5Q8N3I7 341 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 DBNDD1Q9H9R9 158 aa14.48□□□□□ -0.09
COL1A1-201ENST00000225964 CTNNA1P35221 906 aaKnown RBP14.47□□□□□ -0.09
COL1A1-201ENST00000225964 USP14P54578 494 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 ZNF449Q6P9G9 518 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 ATP10AO60312 1499 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 PFKFB1P16118 471 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 CRKLP46109 303 aaKnown RBP14.47□□□□□ -0.09
COL1A1-201ENST00000225964 NOSTRINQ8IVI9 506 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 DPH5Q9H2P9 285 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 WDR17Q8IZU2 1322 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 ARHGAP6O43182 974 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 ADAM9Q13443 819 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 PDE1CQ14123 709 aaPredicted RBP14.47□□□□□ -0.09
COL1A1-201ENST00000225964 KIAA0556O60303 1618 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 CLGNO14967 610 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 SRGAP2BP0DMP2 458 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 MMEL1Q495T6 779 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 SLC38A10Q9HBR0 1119 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 DDX41Q9UJV9 622 aaKnown RBP14.47□□□□□ -0.09
COL1A1-201ENST00000225964 BAG5Q9UL15 447 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 CHL1O00533 1208 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 GDF11O95390 407 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 RPN1P04843 607 aaKnown RBP14.47□□□□□ -0.09
COL1A1-201ENST00000225964 PDE6AP16499 860 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 LRRC24Q50LG9 513 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 RNF10Q8N5U6 811 aaKnown RBP14.47□□□□□ -0.09
COL1A1-201ENST00000225964 XDHP47989 1333 aa14.47□□□□□ -0.09
COL1A1-201ENST00000225964 SGK1O00141 431 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 GANCQ8TET4 914 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 GCNAQ96QF7 691 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 PCDHA1Q9Y5I3 950 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 SUPT20HL1Q3ZLR7 823 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 HS1BP3Q53T59 392 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 ZBTB33Q86T24 672 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 FANCBQ8NB91 859 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 GDAP1L1Q96MZ0 367 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 LMCD1Q9NZU5 365 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 CPSF3Q9UKF6 684 aaKnown RBP14.46□□□□□ -0.09
COL1A1-201ENST00000225964 TRPC5Q9UL62 973 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-201ENST00000225964 KCNQ3O43525 872 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 RNF40O75150 1001 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 ME3Q16798 604 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 RAB44Q7Z6P3 723 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-201ENST00000225964 NLGN1Q8N2Q7 840 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 HAUS8Q9BT25 410 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 INO80B-WBP1J3KQ70 363 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 PNMA8AQ86V59 439 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-201ENST00000225964 CABS1Q96KC9 395 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms