RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 B4GALNT4Q76KP1 1039 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 HAUS4Q9H6D7 363 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 RIOK3O14730 519 aaKnown RBP25.47■■□□□ 1.67
TARBP1-201ENST00000040877 LIFRP42702 1097 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 NDUFA8P51970 172 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 ZNF589Q86UQ0 364 aaPredicted RBP25.47■■□□□ 1.67
TARBP1-201ENST00000040877 AFAP1L2Q8N4X5 818 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 SMC1BQ8NDV3 1235 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 TBC1D31Q96DN5 1066 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 COA1Q9GZY4 146 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 PLCB1Q9NQ66 1216 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 ADD3Q9UEY8 706 aaKnown RBP25.47■■□□□ 1.67
TARBP1-201ENST00000040877 IQGAP3Q86VI3 1631 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 LRCH2Q5VUJ6 765 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 PI4KBQ9UBF8 816 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 CLIC4Q9Y696 253 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 DTNBO60941 627 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 PSMC4P43686 418 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 KLHL7Q8IXQ5 586 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 TSPOAP1O95153 1857 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 ERCC6LQ2NKX8 1250 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 EXOC8Q8IYI6 725 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 ABCC12Q96J65 1359 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 RPS6KA4O75676 772 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 LARP4BQ92615 738 aaKnown RBP25.46■■□□□ 1.67
TARBP1-201ENST00000040877 VIMP08670 466 aaKnown RBP25.46■■□□□ 1.67
TARBP1-201ENST00000040877 DYNLL1P63167 89 aaKnown RBP25.46■■□□□ 1.67
TARBP1-201ENST00000040877 HADHQ16836 314 aaKnown RBP25.46■■□□□ 1.67
TARBP1-201ENST00000040877 MYRIPQ8NFW9 859 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 TTLL11Q8NHH1 800 aa25.46■■□□□ 1.67
TARBP1-201ENST00000040877 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.46■■□□□ 1.676e-8■■■□□ 15.3
TARBP1-201ENST00000040877 POLR2BP30876 1174 aaKnown RBP25.45■■□□□ 1.67
TARBP1-201ENST00000040877 ANTXR1Q9H6X2 564 aa25.45■■□□□ 1.67
TARBP1-201ENST00000040877 SH2B2O14492 632 aaPredicted RBP25.45■■□□□ 1.66
TARBP1-201ENST00000040877 BMP3P12645 472 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 ADKP55263 362 aaKnown RBP25.45■■□□□ 1.66
TARBP1-201ENST00000040877 LRMPQ12912 555 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 CCDC89Q8N998 374 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 CD2APQ9Y5K6 639 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 PDE6CP51160 858 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 CUL4AQ13619 759 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 LCORLQ8N3X6 602 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 DHTKD1Q96HY7 919 aaPredicted RBP25.45■■□□□ 1.66
TARBP1-201ENST00000040877 CLIC6Q96NY7 704 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 TRIM31Q9BZY9 425 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 STK17AQ9UEE5 414 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 PALM3A6NDB9 673 aaPredicted RBP25.45■■□□□ 1.66
TARBP1-201ENST00000040877 BPIFB4P59827 614 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 HYOU1Q9Y4L1 999 aa25.45■■□□□ 1.66
TARBP1-201ENST00000040877 RTKN2Q8IZC4 609 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 GMNNO75496 209 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 TMEM191BP0C7N4 346 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 LONRF3Q496Y0 759 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 HESX1Q9UBX0 185 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 BZW2Q9Y6E2 419 aaKnown RBP25.44■■□□□ 1.66
TARBP1-201ENST00000040877 GOLGA6CA6NDK9 693 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 GOLGA6BA6NDN3 693 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 GOLGA6DP0CG33 693 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 PPFIA1Q13136 1202 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 GOLGA6AQ9NYA3 693 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 SRGAP1Q7Z6B7 1085 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 SLC39A2Q9NP94 309 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 KIAA1024Q9UPX6 916 aa25.44■■□□□ 1.66
TARBP1-201ENST00000040877 A2ML1A8K2U0 1454 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 PRPF3O43395 683 aaKnown RBP25.43■■□□□ 1.66
TARBP1-201ENST00000040877 U2AF2P26368 475 aaKnown RBP eCLIP25.43■■□□□ 1.666e-9■□□□□ 10.5
TARBP1-201ENST00000040877 ARHGEF6Q15052 776 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 LONRF2Q1L5Z9 754 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 FAM47CQ5HY64 1035 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 ODR4Q5SWX8 454 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 FOXP4Q8IVH2 680 aaPredicted RBP25.43■■□□□ 1.66
TARBP1-201ENST00000040877 PROCA1Q8NCQ7 364 aaPredicted RBP25.43■■□□□ 1.66
TARBP1-201ENST00000040877 GRK7Q8WTQ7 553 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 OSBP2Q969R2 916 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 OSBPP22059 807 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 HPDP32754 393 aaPredicted RBP25.43■■□□□ 1.66
TARBP1-201ENST00000040877 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.43■■□□□ 1.66
TARBP1-201ENST00000040877 FANCLQ9NW38 375 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 SERPINA10Q9UK55 444 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 CRCPO75575 148 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 RIC8AQ9NPQ8 531 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 CLRN2A0PK11 232 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 XPOTO43592 962 aaKnown RBP25.43■■□□□ 1.66
TARBP1-201ENST00000040877 H2AFZP0C0S5 128 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 TCP1P17987 556 aaKnown RBP25.43■■□□□ 1.66
TARBP1-201ENST00000040877 EEF1GP26641 437 aaKnown RBP25.43■■□□□ 1.66
TARBP1-201ENST00000040877 H2AFVQ71UI9 128 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 RAB20Q9NX57 234 aa25.43■■□□□ 1.66
TARBP1-201ENST00000040877 GIPC1O14908 333 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 DBNDD1Q9H9R9 158 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 SUGCTQ9HAC7 445 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 ST7Q9NRC1 585 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 MMP1P03956 469 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 FAM81BQ96LP2 452 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 PSDA5PKW4 1024 aaPredicted RBP25.42■■□□□ 1.66
TARBP1-201ENST00000040877 SUSD4Q5VX71 490 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 FAM160B2Q86V87 743 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 SEPT12Q8IYM1 358 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 P3H4Q92791 437 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 SARNPP82979 210 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms