RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 Micall1Q8BGT6 870 aa28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Ccdc43Q9CR29 222 aaKnown RBP28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Sorbs3Q9R1Z8 733 aa28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Ankrd31A0A140LI88 1765 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Ccdc24E9PUW8 296 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Myl3P09542 204 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Opa1P58281 960 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Vcpip1Q8CDG3 1220 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Fbxo18Q8K2I9 1042 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Eif4a3Q91VC3 411 aaKnown RBP28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Gps2Q921N8 327 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Smco2Q9DA21 347 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 4931408C20RikE9PWP9 1381 aa28.49■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Gm1993A6X8I0 212 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 SlxD3Z347 212 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Nr1i2O54915 431 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Prl2c3P04768 224 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Acsbg2Q2XU92 667 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Cmtr1Q9DBC3 837 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Txnrd1Q9JMH6 613 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Nr1d1Q3UV55 615 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Carmil2Q3V3V9 1296 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Rassf2Q8BMS9 326 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Spata2Q8K004 515 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 MlphQ91V27 590 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Prl2c5Q9JLV9 222 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Pex3Q9QXY9 372 aa28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Marf1Q8BJ34 1730 aaKnown RBP28.48■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Vmn2r71L7N2D8 855 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 HmmrQ00547 794 aaKnown RBP28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Foxn3Q499D0 457 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Gimap7Q8R379 293 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Nmt2O70311 529 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Prl7d1P04769 244 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 GabrdP22933 449 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Dynll1P63168 89 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Sec31aQ3UPL0 1230 aaKnown RBP28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Ehmt1Q5DW34 1296 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Ift20Q61025 132 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Gga2Q6P5E6 603 aa28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Eef1gQ9D8N0 437 aaKnown RBP28.47■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Stat5bP42232 786 aa28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Slc7a3P70423 618 aa28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Rnpc3Q3UZ01 514 aaKnown RBP28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Krt40Q6IFX3 439 aa28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Tmem143Q8VD26 458 aa28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Ascc1Q9D8Z1 356 aaKnown RBP28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Sh2b2Q9JID9 621 aa28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Arl6ip4Q9JM93 229 aa28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Myh15E9Q264 1925 aa28.46■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Hmgb1P63158 215 aaKnown RBP28.45■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Lrrc55Q3UY51 311 aa28.45■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Lrrfip1Q3UZ39 729 aaKnown RBP28.45■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 LrmdaQ9D9B4 229 aa28.45■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Sec24cG3X972 1096 aaKnown RBP28.45■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Tmprss11aQ3UQ41 389 aa28.45■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Slc9b1Q8C0X2 565 aa28.45■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 ApobrQ8VBT6 942 aa28.45■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Tor1aip1Q921T2 595 aaKnown RBP28.45■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Smc6Q924W5 1097 aa28.45■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Tktl2Q9D4D4 627 aa28.45■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Bpifb4A2BGH0 617 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Ssrp1Q08943 708 aaKnown RBP28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Exoc3Q6KAR6 755 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Iws1Q8C1D8 766 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Rhobtb3Q9CTN4 611 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Gkap1Q9JMB0 366 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Fkbp3Q62446 224 aaKnown RBP28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Ythdf3Q8BYK6 585 aaKnown RBP28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Trim9Q8C7M3 817 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Dnajc17Q91WT4 303 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Pkd2l2Q9JLG4 621 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Git2Q9JLQ2 708 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Tnip1Q9WUU8 647 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Myh8P13542 1937 aa28.44■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Nol4P60954 483 aa28.43■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Spout1Q3UHX9 385 aaKnown RBP28.43■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 VeztQ3ZK22 780 aa28.43■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Naa35Q6PHQ8 725 aa28.43■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Slc51bQ80WK2 128 aa28.43■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Ddx47Q9CWX9 455 aaKnown RBP28.43■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Zbtb1Q91VL9 713 aa28.43■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 PappaQ8R4K8 1624 aa28.42■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Dnai2A2AC93 623 aa28.42■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Aco1P28271 889 aaKnown RBP28.42■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Ddr1Q03146 911 aa28.42■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Ccp110Q7TSH4 1004 aa28.42■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Pak2Q8CIN4 524 aa28.42■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Frmpd4A2AFR3 1320 aa28.42■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Gm28510A0A087WP28 240 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Ttc13A0A1L1SSC7 844 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Gm6588E9Q3K0 461 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Mx1P09922 631 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 EsrrbQ61539 433 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Snip1Q8BIZ6 383 aaKnown RBP28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Q8VDP2 222 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 AllcQ9JHX6 414 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Izumo3A6PWV3 263 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Slc39a2G3X943 309 aa28.41■■■□□ 2.14
Ccdc9-202ENSMUST00000118976 Nap1l2P51860 460 aa28.41■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms