RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Sycp3P70281 254 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Mettl14Q3UIK4 456 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Morc2aQ69ZX6 1030 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Zscan22Q8BGS5 496 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Iqcb1Q8BP00 598 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Dr1Q91WV0 176 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 SmtnQ921U8 923 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 NkapQ9D0F4 415 aaKnown RBP12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Gstt4Q9D4P7 240 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Cyth1Q9QX11 398 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 1700029H14RikE9PY36 240 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Rasgrf1P27671 1262 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Traf5P70191 558 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Gli2Q0VGT2 1544 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Skap1Q3UUV5 355 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Nxf2Q4ZGD8 691 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Arhgap30Q640N3 1101 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Kiaa1841Q68FF0 718 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 SybuQ8BHS8 665 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Arhgap18Q8K0Q5 663 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Mms19Q9D071 1031 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Nr1d1Q3UV55 615 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Pcdhb12Q91Y07 789 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 IdeQ9JHR7 1019 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Trpc6Q61143 930 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Zbtb7bQ64321 544 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Ccdc87Q8CDL9 855 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Appl2Q8K3G9 662 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Pex19Q8VCI5 299 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Psmg1Q9JK23 289 aa12.98□□□□□ -0.33
Trim56-201ENSMUST00000054384 Wdr62Q3U3T8 1523 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 PcQ05920 1178 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Slc30a9Q5IRJ6 567 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Tsr1Q5SWD9 803 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Atp1a3Q6PIC6 1013 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Dars2Q8BIP0 653 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Fgd4Q91ZT5 766 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Krt36B1AQ75 473 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 IarsQ8BU30 1262 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 E4f1Q8CCE9 783 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Spats2lQ91WJ7 558 aaKnown RBP12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 MlxiplQ99MZ3 864 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Calb1P12658 261 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Fermt3Q8K1B8 665 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Prpsap1Q9D0M1 356 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Dbn1Q9QXS6 706 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Zfp597E9Q6S0 419 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Cyp26a1O55127 497 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Ccdc138Q0VF22 680 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 GssP51855 474 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Serpinb10Q8K1K6 397 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Tmed2Q9R0Q3 201 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Mug2P28666 1451 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Q9DAQ4 598 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 DexiQ9WUQ7 95 aa12.97□□□□□ -0.33
Trim56-201ENSMUST00000054384 Ccdc194A0A140LIT1 234 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Ovgp1Q62010 721 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Ccdc65Q8VHI7 493 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Pcdha12Q91Y18 950 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Dbndd1Q9CZ00 160 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 GsnP13020 780 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Krt26Q3TRJ4 462 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Khdrbs1Q60749 443 aaKnown RBP12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Mgea5Q9EQQ9 916 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Cep152A2AUM9 1736 aaKnown RBP12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Q3KNL4 93 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Usp8Q80U87 1080 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 CnstQ8CBC4 711 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Gm6657A0A1B0GRJ3 277 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Ttll7A4Q9F0 912 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Svs3bQ8BZH8 265 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Cbwd1Q8VEH6 393 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Kdm6aO70546 1401 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Exoc7O35250 697 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Csrnp1P59054 583 aa12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Yars2Q8BYL4 472 aaKnown RBP12.96□□□□□ -0.33
Trim56-201ENSMUST00000054384 Cfap221A9Q751 836 aa12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 Casp8O89110 480 aa12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 SrlQ7TQ48 910 aa12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 Prkag2Q91WG5 566 aa12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 St13Q99L47 371 aaKnown RBP12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 Peg3Q3URU2 1571 aa12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 Zmynd8A2A484 1235 aaKnown RBP12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 Rad51bO35719 350 aa12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 Dclk2Q6PGN3 756 aa12.96□□□□□ -0.34
Trim56-201ENSMUST00000054384 Hcls1P49710 486 aaKnown RBP12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Nom1Q3UFM5 854 aaKnown RBP12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Ccdc185Q3V118 621 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Enox1Q8BHR2 643 aaKnown RBP12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Dpp7Q9ET22 506 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Dhx58Q99J87 678 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Fam217aQ9D9W6 419 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Dnaaf5B9EJR8 853 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Polr2fP61219 127 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Rasgrf2P70392 1189 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Dnajc17Q91WT4 303 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Rgs3Q9DC04 966 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 RabggtaQ9JHK4 567 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Impdh2P24547 514 aa12.95□□□□□ -0.34
Trim56-201ENSMUST00000054384 Taf1bP97358 586 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms