RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 HUNKP57058 714 aa22.81■■□□□ 1.24
PHGDH-210ENST00000641115 USP17L24Q0WX57 530 aa22.81■■□□□ 1.24
PHGDH-210ENST00000641115 SNAPC2Q13487 334 aa22.81■■□□□ 1.24
PHGDH-210ENST00000641115 BRAPQ7Z569 592 aa22.81■■□□□ 1.24
PHGDH-210ENST00000641115 WNK4Q96J92 1243 aa22.81■■□□□ 1.24
PHGDH-210ENST00000641115 FOXP1Q9H334 677 aaPredicted RBP22.81■■□□□ 1.24
PHGDH-210ENST00000641115 RLFQ13129 1914 aa22.8■■□□□ 1.24
PHGDH-210ENST00000641115 SNAP25P60880 206 aa22.8■■□□□ 1.24
PHGDH-210ENST00000641115 FOXD4L6Q3SYB3 417 aaPredicted RBP22.8■■□□□ 1.24
PHGDH-210ENST00000641115 GALNT17Q6IS24 598 aa22.8■■□□□ 1.24
PHGDH-210ENST00000641115 TYW1BQ6NUM6 668 aa22.8■■□□□ 1.24
PHGDH-210ENST00000641115 FOXD4L3Q6VB84 417 aaPredicted RBP22.8■■□□□ 1.24
PHGDH-210ENST00000641115 FASTKD5Q7L8L6 764 aaKnown RBP22.8■■□□□ 1.24
PHGDH-210ENST00000641115 FBXO11Q86XK2 927 aa22.8■■□□□ 1.24
PHGDH-210ENST00000641115 COA7Q96BR5 231 aa22.8■■□□□ 1.24
PHGDH-210ENST00000641115 PCDHA1Q9Y5I3 950 aa22.8■■□□□ 1.24
PHGDH-210ENST00000641115 GJA5P36382 358 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 CATSPERGQ6ZRH7 1159 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 ZMYND12Q9H0C1 365 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 C6orf50Q9HD87 102 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 CTDP1Q9Y5B0 961 aaPredicted RBP22.79■■□□□ 1.24
PHGDH-210ENST00000641115 ESYT2A0FGR8 921 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 BTBD18B2RXH4 712 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 KIF28PB7ZC32 967 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 FDX1P10109 184 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 U2AF2P26368 475 aaKnown RBP eCLIP22.79■■□□□ 1.244e-10■■□□□ 11.5
PHGDH-210ENST00000641115 GNA11P29992 359 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 COG2Q14746 738 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 CCDC174Q6PII3 467 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 CLEC17AQ6ZS10 378 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 PCDHA4Q9UN74 947 aa22.79■■□□□ 1.24
PHGDH-210ENST00000641115 COL11A1P12107 1806 aaPredicted RBP22.78■■□□□ 1.24
PHGDH-210ENST00000641115 MYPNQ86TC9 1320 aa22.78■■□□□ 1.24
PHGDH-210ENST00000641115 SMCO2A6NFE2 343 aa22.78■■□□□ 1.24
PHGDH-210ENST00000641115 ZBTB48P10074 688 aaPredicted RBP22.78■■□□□ 1.24
PHGDH-210ENST00000641115 USH1GQ495M9 461 aa22.78■■□□□ 1.24
PHGDH-210ENST00000641115 TREML2Q5T2D2 321 aa22.78■■□□□ 1.24
PHGDH-210ENST00000641115 BLIDQ8IZY5 108 aa22.78■■□□□ 1.24
PHGDH-210ENST00000641115 DAGLBQ8NCG7 672 aa22.78■■□□□ 1.24
PHGDH-210ENST00000641115 AGTPBP1Q9UPW5 1226 aa22.78■■□□□ 1.24
PHGDH-210ENST00000641115 TCHHQ07283 1943 aa22.77■■□□□ 1.24
PHGDH-210ENST00000641115 BAG4O95429 457 aaKnown RBP22.77■■□□□ 1.24
PHGDH-210ENST00000641115 ADCY7P51828 1080 aa22.77■■□□□ 1.24
PHGDH-210ENST00000641115 GTF2A2P52657 109 aa22.77■■□□□ 1.24
PHGDH-210ENST00000641115 NPY5RQ15761 445 aa22.77■■□□□ 1.24
PHGDH-210ENST00000641115 NOSTRINQ8IVI9 506 aa22.77■■□□□ 1.24
PHGDH-210ENST00000641115 BICD2Q8TD16 824 aa22.77■■□□□ 1.24
PHGDH-210ENST00000641115 ZBED4O75132 1171 aa22.76■■□□□ 1.23
PHGDH-210ENST00000641115 HOXA7P31268 230 aaPredicted RBP22.76■■□□□ 1.23
PHGDH-210ENST00000641115 NR5A1Q13285 461 aa22.76■■□□□ 1.23
PHGDH-210ENST00000641115 PABPC4Q13310 644 aaKnown RBP eCLIP22.76■■□□□ 1.239e-7■■■■□ 21.6
PHGDH-210ENST00000641115 OXER1Q8TDS5 423 aa22.76■■□□□ 1.23
PHGDH-210ENST00000641115 SLC38A10Q9HBR0 1119 aa22.76■■□□□ 1.23
PHGDH-210ENST00000641115 HOXC10Q9NYD6 342 aa22.76■■□□□ 1.23
PHGDH-210ENST00000641115 PNMA2Q9UL42 364 aa22.76■■□□□ 1.23
PHGDH-210ENST00000641115 CETPP11597 493 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 DSG3P32926 999 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 SPRYD7Q5W111 196 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 FAM173BQ6P4H8 233 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 SAPCD2Q86UD0 394 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 ZNF784Q8NCA9 323 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-210ENST00000641115 ATG4CQ96DT6 458 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 GLT8D2Q9H1C3 349 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 VWA5AO00534 786 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 ICAM1P05362 532 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 NCLP19338 710 aaKnown RBP22.75■■□□□ 1.23
PHGDH-210ENST00000641115 KRT85P78386 507 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 IRX3P78415 501 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-210ENST00000641115 DNM1Q05193 864 aaKnown RBP22.75■■□□□ 1.23
PHGDH-210ENST00000641115 FSTL1Q12841 308 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 MKRN3Q13064 507 aaKnown RBP22.75■■□□□ 1.23
PHGDH-210ENST00000641115 CUL5Q93034 780 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 CCPG1Q9ULG6 757 aa22.75■■□□□ 1.23
PHGDH-210ENST00000641115 A0A0G2JMZ2 1700 aa22.74■■□□□ 1.23
PHGDH-210ENST00000641115 ZNF157P51786 506 aaPredicted RBP22.74■■□□□ 1.23
PHGDH-210ENST00000641115 MOGSQ13724 837 aa22.74■■□□□ 1.23
PHGDH-210ENST00000641115 MYSM1Q5VVJ2 828 aa22.74■■□□□ 1.23
PHGDH-210ENST00000641115 ZNF396Q96N95 335 aaPredicted RBP22.74■■□□□ 1.23
PHGDH-210ENST00000641115 RIC8AQ9NPQ8 531 aa22.74■■□□□ 1.23
PHGDH-210ENST00000641115 TLL2Q9Y6L7 1015 aa22.74■■□□□ 1.23
PHGDH-210ENST00000641115 ABCB11O95342 1321 aa22.73■■□□□ 1.23
PHGDH-210ENST00000641115 SPDYE16A6NNV3 312 aaPredicted RBP22.73■■□□□ 1.23
PHGDH-210ENST00000641115 GOLGA6L22H0YM25 854 aa22.73■■□□□ 1.23
PHGDH-210ENST00000641115 MRPL12P52815 198 aaKnown RBP22.73■■□□□ 1.23
PHGDH-210ENST00000641115 RGMBQ6NW40 437 aa22.73■■□□□ 1.23
PHGDH-210ENST00000641115 CPXCR1Q8N123 301 aa22.73■■□□□ 1.23
PHGDH-210ENST00000641115 REXO1Q8N1G1 1221 aaKnown RBP22.73■■□□□ 1.23
PHGDH-210ENST00000641115 CHAMP1Q96JM3 812 aa22.73■■□□□ 1.23
PHGDH-210ENST00000641115 PSTPIP2Q9H939 334 aa22.73■■□□□ 1.23
PHGDH-210ENST00000641115 ABT1Q9ULW3 272 aaKnown RBP22.73■■□□□ 1.23
PHGDH-210ENST00000641115 ADAMTS5Q9UNA0 930 aa22.73■■□□□ 1.23
PHGDH-210ENST00000641115 RBBP6Q7Z6E9 1792 aaKnown RBP22.73■■□□□ 1.23
PHGDH-210ENST00000641115 ZNF536O15090 1300 aa22.73■■□□□ 1.23
PHGDH-210ENST00000641115 CCL15-CCL14A0A0B4J2E2 113 aa22.72■■□□□ 1.23
PHGDH-210ENST00000641115 TMEM88BA6NKF7 163 aa22.72■■□□□ 1.23
PHGDH-210ENST00000641115 OSBPP22059 807 aa22.72■■□□□ 1.23
PHGDH-210ENST00000641115 CCL15Q16663 113 aa22.72■■□□□ 1.23
PHGDH-210ENST00000641115 ATL3Q6DD88 541 aa22.72■■□□□ 1.23
PHGDH-210ENST00000641115 TNFRSF25Q93038 417 aa22.72■■□□□ 1.23
PHGDH-210ENST00000641115 MS4A4AQ96JQ5 239 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms