RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 RIPK3Q9Y572 518 aa15.36■□□□□ 0.05
GTF3A-209ENST00000640289 ATP2A1O14983 1001 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 FMNL1O95466 1100 aaPredicted RBP15.35■□□□□ 0.05
GTF3A-209ENST00000640289 ADD1P35611 737 aaKnown RBP15.35■□□□□ 0.05
GTF3A-209ENST00000640289 RCAN1P53805 252 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 CCT2P78371 535 aaKnown RBP15.35■□□□□ 0.05
GTF3A-209ENST00000640289 CCNA1P78396 465 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 STK3Q13188 491 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 CDC37Q16543 378 aaPredicted RBP15.35■□□□□ 0.05
GTF3A-209ENST00000640289 RTN1Q16799 776 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 QRICH1Q2TAL8 776 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 WDR78Q5VTH9 848 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 TMTC3Q6ZXV5 915 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 NCAPG2Q86XI2 1143 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 RIOX2Q8IUF8 465 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 CCDC82Q8N4S0 544 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 PIBF1Q8WXW3 757 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 PIGSQ96S52 555 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 RIOX1Q9H6W3 641 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 ZSWIM8A7E2V4 1837 aa15.35■□□□□ 0.05
GTF3A-209ENST00000640289 TNPO2O14787 897 aaKnown RBP15.34■□□□□ 0.05
GTF3A-209ENST00000640289 ICAM1P05362 532 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 MAPK4P31152 587 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 GNAQP50148 359 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 OAZ1P54368 228 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 FCGRTP55899 365 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 RABEP1Q15276 862 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 GPR142Q7Z601 462 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 HOMER1Q86YM7 354 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
GTF3A-209ENST00000640289 MTMR8Q96EF0 704 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 ZNF274Q96GC6 653 aaPredicted RBP15.34■□□□□ 0.05
GTF3A-209ENST00000640289 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 NCOA5Q9HCD5 579 aaKnown RBP15.34■□□□□ 0.05
GTF3A-209ENST00000640289 PRDM10Q9NQV6 1147 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 HOMER2Q9NSB8 354 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 RBM28Q9NW13 759 aaKnown RBP15.34■□□□□ 0.05
GTF3A-209ENST00000640289 CCPG1Q9ULG6 757 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 NID2Q14112 1375 aa15.34■□□□□ 0.05
GTF3A-209ENST00000640289 hCG_1642624A0A1W2PR95 340 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 LARGE1O95461 756 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 SLC25A27O95847 323 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 ALAS1P13196 640 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 ANKRD1Q15327 319 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 OTOP1Q7RTM1 612 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 SHCBP1Q8NEM2 672 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 LZTS2Q9BRK4 669 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 CWC22Q9HCG8 908 aaKnown RBP15.33■□□□□ 0.04
GTF3A-209ENST00000640289 TRIM17Q9Y577 477 aa15.33■□□□□ 0.04
GTF3A-209ENST00000640289 ZBTB5O15062 677 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 PPP1R11O60927 126 aaPredicted RBP15.32■□□□□ 0.04
GTF3A-209ENST00000640289 PPFIA3O75145 1194 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 FUT2Q10981 343 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 ME3Q16798 604 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 USH1GQ495M9 461 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 PLEKHH3Q7Z736 793 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 MROH8Q9H579 483 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 GABRQQ9UN88 632 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 CNTNAP5Q8WYK1 1306 aa15.32■□□□□ 0.04
GTF3A-209ENST00000640289 COL11A1P12107 1806 aaPredicted RBP15.31■□□□□ 0.04
GTF3A-209ENST00000640289 CD2BP2O95400 341 aaKnown RBP15.31■□□□□ 0.04
GTF3A-209ENST00000640289 SMARCA1P28370 1054 aa15.31■□□□□ 0.04
GTF3A-209ENST00000640289 PRKCZQ05513 592 aa15.31■□□□□ 0.04
GTF3A-209ENST00000640289 SCRN1Q12765 414 aa15.31■□□□□ 0.04
GTF3A-209ENST00000640289 MUM1L1Q5H9M0 696 aa15.31■□□□□ 0.04
GTF3A-209ENST00000640289 CTU1Q7Z7A3 348 aaKnown RBP15.31■□□□□ 0.04
GTF3A-209ENST00000640289 COA7Q96BR5 231 aa15.31■□□□□ 0.04
GTF3A-209ENST00000640289 RRP36Q96EU6 259 aaKnown RBP15.31■□□□□ 0.04
GTF3A-209ENST00000640289 TRERF1Q96PN7 1200 aa15.31■□□□□ 0.04
GTF3A-209ENST00000640289 RNF146Q9NTX7 359 aa15.31■□□□□ 0.04
GTF3A-209ENST00000640289 SRRDQ9UH36 339 aa15.31■□□□□ 0.04
GTF3A-209ENST00000640289 PNMA6FA0A0J9YX94 578 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 CCDC196A0A1B0GTZ2 297 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 PFKFB2O60825 505 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 DTNBO60941 627 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 PTPREP23469 700 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 COPB2P35606 906 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 PPP2R5BQ15173 497 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 NTRK3Q16288 839 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 MORN1Q5T089 497 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 FBXO11Q86XK2 927 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 NECAB1Q8N987 351 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 CHST13Q8NET6 341 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 PHKBQ93100 1093 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 AMNQ9BXJ7 453 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
GTF3A-209ENST00000640289 ACAD9Q9H845 621 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 GJD2Q9UKL4 321 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 IVNS1ABPQ9Y6Y0 642 aa15.3■□□□□ 0.04
GTF3A-209ENST00000640289 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 NFIBO00712 420 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 GNRH1P01148 92 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 FLT3LGP49771 235 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 GRB14Q14449 540 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 ARHGEF6Q15052 776 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 TKFCQ3LXA3 575 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 MMP19Q99542 508 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 SEC63Q9UGP8 760 aaKnown RBP15.29■□□□□ 0.04
GTF3A-209ENST00000640289 LIMCH1Q9UPQ0 1083 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms