RNA–Protein interactions for RNA: ENST00000638963.1

PAX6-246, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-246ENST00000638963 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 SHISA4Q96DD7 197 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 MTMR8Q96EF0 704 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
PAX6-246ENST00000638963 AGBL1Q96MI9 1066 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
PAX6-246ENST00000638963 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 BTBD7Q9P203 1132 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 ORC3Q9UBD5 711 aaPredicted RBP11.11□□□□□ -0.63
PAX6-246ENST00000638963 ZNF536O15090 1300 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 PRPF3O43395 683 aaKnown RBP11.11□□□□□ -0.63
PAX6-246ENST00000638963 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
PAX6-246ENST00000638963 GJB2P29033 226 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 PABPC4Q13310 644 aaKnown RBP eCLIP11.11□□□□□ -0.63
PAX6-246ENST00000638963 TMEM132BQ14DG7 1078 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 TAF1CQ15572 869 aaPredicted RBP11.11□□□□□ -0.63
PAX6-246ENST00000638963 USH1GQ495M9 461 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
PAX6-246ENST00000638963 HEATR3Q7Z4Q2 680 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 SMCR8Q8TEV9 937 aaPredicted RBP11.11□□□□□ -0.63
PAX6-246ENST00000638963 COA7Q96BR5 231 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 SLC38A10Q9HBR0 1119 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 CPA4Q9UI42 421 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
PAX6-246ENST00000638963 ZBTB5O15062 677 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 ZBED4O75132 1171 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 CDKL5O76039 1030 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 HSP90AA1P07900 732 aaKnown RBP11.1□□□□□ -0.63
PAX6-246ENST00000638963 CRHR2Q13324 411 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 PLS1Q14651 629 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 WWC2Q6AWC2 1192 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 OTUD7BQ6GQQ9 843 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 TYW1BQ6NUM6 668 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 TRIM22Q8IYM9 498 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 ANKRD13CQ8N6S4 541 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 LLPHQ9BRT6 129 aaKnown RBP11.1□□□□□ -0.63
PAX6-246ENST00000638963 RNF26Q9BY78 433 aaPredicted RBP11.1□□□□□ -0.63
PAX6-246ENST00000638963 HOMER2Q9NSB8 354 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 HOXC10Q9NYD6 342 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 VPS54Q9P1Q0 977 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 RBPJLQ9UBG7 517 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 PNMA3Q9UL41 463 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 ADAMTS5Q9UNA0 930 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 SMC3Q9UQE7 1217 aa11.1□□□□□ -0.63
PAX6-246ENST00000638963 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 ADGRA2Q96PE1 1338 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 ZSWIM8A7E2V4 1837 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 PNMA6FA0A0J9YX94 578 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 ADAMTS3O15072 1205 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 SCG2P13521 617 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 SMARCA1P28370 1054 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 INHBEP58166 350 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 AKAP17AQ02040 695 aaKnown RBP11.09□□□□□ -0.63
PAX6-246ENST00000638963 GUCY1B3Q02153 619 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 PFKFB3Q16875 520 aaPredicted RBP11.09□□□□□ -0.63
PAX6-246ENST00000638963 Q3C1V9 767 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 LBX2Q6XYB7 198 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 PARK7Q99497 189 aaKnown RBP11.09□□□□□ -0.63
PAX6-246ENST00000638963 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 SEC63Q9UGP8 760 aaKnown RBP11.09□□□□□ -0.63
PAX6-246ENST00000638963 ZNF214Q9UL59 606 aaPredicted RBP11.09□□□□□ -0.63
PAX6-246ENST00000638963 CCPG1Q9ULG6 757 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 RIPK3Q9Y572 518 aa11.09□□□□□ -0.63
PAX6-246ENST00000638963 CTDP1Q9Y5B0 961 aaPredicted RBP11.09□□□□□ -0.63
PAX6-246ENST00000638963 STXBP3O00186 592 aa11.08□□□□□ -0.64
PAX6-246ENST00000638963 TBC1D8O95759 1140 aa11.08□□□□□ -0.64
PAX6-246ENST00000638963 MAP2K2P36507 400 aa11.08□□□□□ -0.64
PAX6-246ENST00000638963 SNRNP48Q6IEG0 339 aaKnown RBP11.08□□□□□ -0.64
PAX6-246ENST00000638963 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
PAX6-246ENST00000638963 KCNJ14Q9UNX9 436 aa11.08□□□□□ -0.64
PAX6-246ENST00000638963 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
PAX6-246ENST00000638963 TRPA1O75762 1119 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 DEXIO95424 95 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 ICAM1P05362 532 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 ALAS1P13196 640 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 MUM1L1Q5H9M0 696 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 DNAJC5GQ8N7S2 189 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 FAM184AQ8NB25 1140 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 INTS4Q96HW7 963 aaKnown RBP11.07□□□□□ -0.64
PAX6-246ENST00000638963 AMNQ9BXJ7 453 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 SPATC1LQ9H0A9 340 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 RNF186Q9NXI6 227 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 PCDHA1Q9Y5I3 950 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 OPLAHO14841 1288 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 STAT3P40763 770 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 NAPAP54920 295 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 ERVK-9P63128 1117 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 ERVK-24P63145 666 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
PAX6-246ENST00000638963 TBC1D5Q92609 795 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 MOV10L1Q9BXT6 1211 aaKnown RBP11.07□□□□□ -0.64
PAX6-246ENST00000638963 TEX13BQ9BXU2 312 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 PORCNQ9H237 461 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 ZFYVE28Q9HCC9 887 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 ZCCHC17Q9NP64 241 aaKnown RBP11.07□□□□□ -0.64
PAX6-246ENST00000638963 BARHL2Q9NY43 387 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 TSKSQ9UJT2 592 aa11.07□□□□□ -0.64
PAX6-246ENST00000638963 RABGAP1Q9Y3P9 1069 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms