RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 STAG1Q8WVM7 1258 aa19.37■□□□□ 0.69
COLCA2-206ENST00000638573 DDX11Q96FC9 970 aa19.37■□□□□ 0.69
COLCA2-206ENST00000638573 PURBQ96QR8 312 aaKnown RBP19.37■□□□□ 0.69
COLCA2-206ENST00000638573 GDF15Q99988 308 aa19.37■□□□□ 0.69
COLCA2-206ENST00000638573 TMEM47Q9BQJ4 181 aa19.37■□□□□ 0.69
COLCA2-206ENST00000638573 PRR12Q9ULL5 1215 aa19.37■□□□□ 0.69
COLCA2-206ENST00000638573 SYNPO2Q9UMS6 1093 aa19.37■□□□□ 0.69
COLCA2-206ENST00000638573 CTDP1Q9Y5B0 961 aaPredicted RBP19.37■□□□□ 0.69
COLCA2-206ENST00000638573 DNM1LO00429 736 aa19.36■□□□□ 0.69
COLCA2-206ENST00000638573 ADCYAP1R1P41586 468 aa19.36■□□□□ 0.69
COLCA2-206ENST00000638573 RCSD1Q6JBY9 416 aa19.36■□□□□ 0.69
COLCA2-206ENST00000638573 LRCH3Q96II8 777 aa19.36■□□□□ 0.69
COLCA2-206ENST00000638573 GPCPD1Q9NPB8 672 aa19.36■□□□□ 0.69
COLCA2-206ENST00000638573 ASTN1O14525 1302 aa19.35■□□□□ 0.69
COLCA2-206ENST00000638573 ZMYM6O95789 1325 aa19.35■□□□□ 0.69
COLCA2-206ENST00000638573 MSCO60682 206 aa19.35■□□□□ 0.69
COLCA2-206ENST00000638573 RTP1P59025 263 aa19.35■□□□□ 0.69
COLCA2-206ENST00000638573 MDM2Q00987 491 aaPredicted RBP19.35■□□□□ 0.69
COLCA2-206ENST00000638573 AKNAD1Q5T1N1 836 aa19.35■□□□□ 0.69
COLCA2-206ENST00000638573 CPVLQ9H3G5 476 aa19.35■□□□□ 0.69
COLCA2-206ENST00000638573 RNF146Q9NTX7 359 aa19.35■□□□□ 0.69
COLCA2-206ENST00000638573 ZHX1Q9UKY1 873 aaPredicted RBP19.35■□□□□ 0.69
COLCA2-206ENST00000638573 MYADML2A6NDP7 307 aa19.34■□□□□ 0.69
COLCA2-206ENST00000638573 ALAS1P13196 640 aa19.34■□□□□ 0.69
COLCA2-206ENST00000638573 COPB2P35606 906 aa19.34■□□□□ 0.69
COLCA2-206ENST00000638573 ANKRD35Q8N283 1001 aa19.34■□□□□ 0.69
COLCA2-206ENST00000638573 XPNPEP3Q9NQH7 507 aa19.34■□□□□ 0.69
COLCA2-206ENST00000638573 ATP11BQ9Y2G3 1177 aa19.34■□□□□ 0.69
COLCA2-206ENST00000638573 DIS3Q9Y2L1 958 aaKnown RBP19.34■□□□□ 0.69
COLCA2-206ENST00000638573 ZNFX1Q9P2E3 1918 aaKnown RBP19.33■□□□□ 0.69
COLCA2-206ENST00000638573 SOWAHBA6NEL2 793 aa19.33■□□□□ 0.68
COLCA2-206ENST00000638573 TRIM60Q495X7 471 aa19.33■□□□□ 0.68
COLCA2-206ENST00000638573 FAM160B2Q86V87 743 aa19.33■□□□□ 0.68
COLCA2-206ENST00000638573 CHURC1Q8WUH1 139 aa19.33■□□□□ 0.68
COLCA2-206ENST00000638573 DSCC1Q9BVC3 393 aa19.33■□□□□ 0.68
COLCA2-206ENST00000638573 A1CFQ9NQ94 594 aaKnown RBP19.33■□□□□ 0.68
COLCA2-206ENST00000638573 KBTBD13C9JR72 458 aa19.32■□□□□ 0.68
COLCA2-206ENST00000638573 CDC45O75419 566 aa19.32■□□□□ 0.68
COLCA2-206ENST00000638573 TOP1P11387 765 aaKnown RBP19.32■□□□□ 0.68
COLCA2-206ENST00000638573 TMEM63BQ5T3F8 832 aa19.32■□□□□ 0.68
COLCA2-206ENST00000638573 SLC39A5Q6ZMH5 540 aa19.32■□□□□ 0.68
COLCA2-206ENST00000638573 MFSD6Q6ZSS7 791 aa19.32■□□□□ 0.68
COLCA2-206ENST00000638573 CHST13Q8NET6 341 aa19.32■□□□□ 0.68
COLCA2-206ENST00000638573 TRERF1Q96PN7 1200 aa19.32■□□□□ 0.68
COLCA2-206ENST00000638573 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.32■□□□□ 0.68
COLCA2-206ENST00000638573 CTNNA3Q9UI47 895 aa19.32■□□□□ 0.68
COLCA2-206ENST00000638573 PLXNA1Q9UIW2 1896 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 B4E1Z4 1266 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 SGSM2O43147 1006 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 GOLGA8HP0CJ92 632 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 RARBP10826 455 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 PDHBP11177 359 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 OAZ1P54368 228 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 MAMDC4Q6UXC1 1216 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 KIAA1211Q6ZU35 1233 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.31■□□□□ 0.68
COLCA2-206ENST00000638573 ARMCX2Q7L311 632 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 SH3RF1Q7Z6J0 888 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 CCDC144CPQ8IYA2 1237 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 ARRDC4Q8NCT1 418 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 DCAF4Q8WV16 495 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 ACAD9Q9H845 621 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 CNPY2Q9Y2B0 182 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 TAF6LQ9Y6J9 622 aa19.31■□□□□ 0.68
COLCA2-206ENST00000638573 LAMA4Q16363 1823 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 SYNRGQ9UMZ2 1314 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.3■□□□□ 0.68
COLCA2-206ENST00000638573 KDM4AO75164 1064 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 ADAMTS4O75173 837 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 SYDE2Q5VT97 1194 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 FAM133AQ8N9E0 248 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 KATNBL1Q9H079 304 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 TCP11L1Q9NUJ3 509 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 CCPG1Q9ULG6 757 aa19.3■□□□□ 0.68
COLCA2-206ENST00000638573 SYNGAP1Q96PV0 1343 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 POTEB2H3BUK9 544 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 NFIBO00712 420 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 ZNF213O14771 459 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 PLA2G6O60733 806 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 AKR1A1P14550 325 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 ACVR2BQ13705 512 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 IMMTQ16891 758 aaKnown RBP19.29■□□□□ 0.68
COLCA2-206ENST00000638573 NSMFQ6X4W1 530 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 RANBP17Q9H2T7 1088 aaKnown RBP19.29■□□□□ 0.68
COLCA2-206ENST00000638573 NRBP1Q9UHY1 535 aa19.29■□□□□ 0.68
COLCA2-206ENST00000638573 PTH1RQ03431 593 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 ZNF543Q08ER8 600 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 CCDC144BQ3MJ40 725 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 BTNL9Q6UXG8 535 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 EEPD1Q7L9B9 569 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 ESYT1Q9BSJ8 1104 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 UBE2OQ9C0C9 1292 aaKnown RBP19.28■□□□□ 0.68
COLCA2-206ENST00000638573 UBA5Q9GZZ9 404 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 RNF41Q9H4P4 317 aaPredicted RBP19.28■□□□□ 0.68
COLCA2-206ENST00000638573 PRDM5Q9NQX1 630 aaPredicted RBP19.28■□□□□ 0.68
COLCA2-206ENST00000638573 FBXO40Q9UH90 709 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 PHF24Q9UPV7 400 aa19.28■□□□□ 0.68
COLCA2-206ENST00000638573 A0A1W2PQ45 241 aaPredicted RBP19.27■□□□□ 0.68
COLCA2-206ENST00000638573 A0A1W2PQY0 241 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms