RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 PDE8AO60658 829 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 NFICP08651 508 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 SLFN14P0C7P3 912 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 FGFR1P11362 822 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 RAG1P15918 1043 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 L1CAMP32004 1257 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 SOX5P35711 763 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 PDE3AQ14432 1141 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 FAM209AQ5JX71 171 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 ODR4Q5SWX8 454 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 OGFOD3Q6PK18 319 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 SCUBE1Q8IWY4 988 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 NETO1Q8TDF5 533 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 JDP2Q8WYK2 163 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 LIN37Q96GY3 246 aaPredicted RBP5.13□□□□□ -1.59
CHD2-228ENST00000637613 TMEM87BQ96K49 555 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 USP26Q9BXU7 913 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 KLHL25Q9H0H3 589 aa5.13□□□□□ -1.59
CHD2-228ENST00000637613 TRBV23-1A0A0A0MS06 115 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 TRAV20A0A0B4J274 112 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 PRAMEF27A3QJZ7 478 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 AGRPO00253 132 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 TMPRSS2O15393 492 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 CBFA2T2O43439 604 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 RAPGEF3O95398 923 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 EYA4O95677 639 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 NAT2P11245 290 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 POU3F2P20265 443 aaPredicted RBP5.12□□□□□ -1.59
CHD2-228ENST00000637613 YARSP54577 528 aaKnown RBP5.12□□□□□ -1.59
CHD2-228ENST00000637613 EVA1CP58658 441 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 PRKCQQ04759 706 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 HSP90AA2PQ14568 343 aaPredicted RBP5.12□□□□□ -1.59
CHD2-228ENST00000637613 ANKRD39Q53RE8 183 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 PPM1JQ5JR12 505 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 YOD1Q5VVQ6 348 aaPredicted RBP5.12□□□□□ -1.59
CHD2-228ENST00000637613 SLC23A3Q6PIS1 610 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 HID1Q8IV36 788 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 FMNL3Q8IVF7 1028 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 PLD6Q8N2A8 252 aaKnown RBP5.12□□□□□ -1.59
CHD2-228ENST00000637613 RNF214Q8ND24 703 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 FAM13CQ8NE31 585 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 SMARCC1Q92922 1105 aaPredicted RBP5.12□□□□□ -1.59
CHD2-228ENST00000637613 OSBP2Q969R2 916 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 SLC6A18Q96N87 628 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 APBA2Q99767 749 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 AARSD1Q9BTE6 412 aaKnown RBP5.12□□□□□ -1.59
CHD2-228ENST00000637613 SEMA6CQ9H3T2 930 aa5.12□□□□□ -1.59
CHD2-228ENST00000637613 GEMIN8Q9NWZ8 242 aaKnown RBP5.12□□□□□ -1.59
CHD2-228ENST00000637613 CCDC194A0A1B0GVG4 234 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 C9IYK1 514 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 EPHX1P07099 455 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 SDSP20132 328 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 ETF1P62495 437 aaKnown RBP5.11□□□□□ -1.59
CHD2-228ENST00000637613 PPP2R2AP63151 447 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 NFKB2Q00653 900 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 ID3Q02535 119 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 SLBPQ14493 270 aaKnown RBP eCLIP5.11□□□□□ -1.59
CHD2-228ENST00000637613 SV2CQ496J9 727 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 ZNF227Q86WZ6 799 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 ZNF507Q8TCN5 953 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 DDX1Q92499 740 aaKnown RBP5.11□□□□□ -1.59
CHD2-228ENST00000637613 C8orf48Q96LL4 319 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 CCDC74BQ96LY2 380 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 HAUS7Q99871 368 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 TARS2Q9BW92 718 aaKnown RBP5.11□□□□□ -1.59
CHD2-228ENST00000637613 GSX1Q9H4S2 264 aaPredicted RBP5.11□□□□□ -1.59
CHD2-228ENST00000637613 FBRSQ9HAH7 460 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 DISC1Q9NRI5 854 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 C1GALT1Q9NS00 363 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 MAGEC2Q9UBF1 373 aaPredicted RBP5.11□□□□□ -1.59
CHD2-228ENST00000637613 PPP1R9AQ9ULJ8 1098 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 CSADQ9Y600 493 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 EID1Q9Y6B2 187 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 WASHC2CQ9Y4E1 1318 aa5.11□□□□□ -1.59
CHD2-228ENST00000637613 FAM86C2PA6NEL3 165 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 NPIPB6E9PJ23 425 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 DNAJC8O75937 253 aaPredicted RBP5.1□□□□□ -1.59
CHD2-228ENST00000637613 ITGAVP06756 1048 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 C6orf222P0C671 652 aaPredicted RBP5.1□□□□□ -1.59
CHD2-228ENST00000637613 ADH5P11766 374 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 CNGA1P29973 690 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 CD96P40200 585 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 NKG7Q16617 165 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 CYP27C1Q4G0S4 372 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 AXDND1Q5T1B0 1012 aaPredicted RBP5.1□□□□□ -1.59
CHD2-228ENST00000637613 SEZ6L2Q6UXD5 910 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 LRRTM3Q86VH5 581 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 GSTCDQ8NEC7 633 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 PPP1R13LQ8WUF5 828 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 VWCEQ96DN2 955 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 MRGPRX3Q96LB0 322 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 CEP89Q96ST8 783 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.1□□□□□ -1.59
CHD2-228ENST00000637613 TRIM39Q9HCM9 518 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 APEX2Q9UBZ4 518 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 MCM8Q9UJA3 840 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 ACTL7BQ9Y614 415 aa5.1□□□□□ -1.59
CHD2-228ENST00000637613 PHLDB1Q86UU1 1377 aa5.09□□□□□ -1.59
CHD2-228ENST00000637613 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.09□□□□□ -1.59
CHD2-228ENST00000637613 SHOXO15266 292 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms