RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 ZNFX1Q9P2E3 1918 aaKnown RBP19.88■□□□□ 0.77
LIN28B-202ENST00000635857 PRC1O43663 620 aa19.88■□□□□ 0.77
LIN28B-202ENST00000635857 CAPN2P17655 700 aa19.88■□□□□ 0.77
LIN28B-202ENST00000635857 RGS19P49795 217 aa19.88■□□□□ 0.77
LIN28B-202ENST00000635857 CCL14Q16627 93 aa19.88■□□□□ 0.77
LIN28B-202ENST00000635857 NFXL1Q6ZNB6 911 aa19.88■□□□□ 0.77
LIN28B-202ENST00000635857 TMEM87BQ96K49 555 aa19.88■□□□□ 0.77
LIN28B-202ENST00000635857 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.88■□□□□ 0.77
LIN28B-202ENST00000635857 RANBP17Q9H2T7 1088 aaKnown RBP19.88■□□□□ 0.77
LIN28B-202ENST00000635857 RNF146Q9NTX7 359 aa19.88■□□□□ 0.77
LIN28B-202ENST00000635857 PLXNA1Q9UIW2 1896 aa19.88■□□□□ 0.77
LIN28B-202ENST00000635857 CENPFP49454 3210 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 CCDC69A6NI79 296 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 ICAM1P05362 532 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 SNAP25P60880 206 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 OLFML2BQ68BL8 750 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 TMTC2Q8N394 836 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 NPLOC4Q8TAT6 608 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 AGBL1Q96MI9 1066 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 TRERF1Q96PN7 1200 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 RIPK3Q9Y572 518 aa19.87■□□□□ 0.77
LIN28B-202ENST00000635857 PGK2P07205 417 aa19.86■□□□□ 0.77
LIN28B-202ENST00000635857 DEFB118Q96PH6 123 aa19.86■□□□□ 0.77
LIN28B-202ENST00000635857 NEK1Q96PY6 1258 aa19.86■□□□□ 0.77
LIN28B-202ENST00000635857 DIS3Q9Y2L1 958 aaKnown RBP19.86■□□□□ 0.77
LIN28B-202ENST00000635857 PFASO15067 1338 aa19.85■□□□□ 0.77
LIN28B-202ENST00000635857 ZNF536O15090 1300 aa19.85■□□□□ 0.77
LIN28B-202ENST00000635857 EIF5BO60841 1220 aaKnown RBP19.85■□□□□ 0.77
LIN28B-202ENST00000635857 COBLO75128 1261 aa19.85■□□□□ 0.77
LIN28B-202ENST00000635857 TFRCP02786 760 aaKnown RBP19.85■□□□□ 0.77
LIN28B-202ENST00000635857 HMGB1P09429 215 aaKnown RBP19.85■□□□□ 0.77
LIN28B-202ENST00000635857 EN2P19622 333 aaPredicted RBP19.85■□□□□ 0.77
LIN28B-202ENST00000635857 GJA8P48165 433 aa19.85■□□□□ 0.77
LIN28B-202ENST00000635857 ANTXR2P58335 489 aa19.85■□□□□ 0.77
LIN28B-202ENST00000635857 CACNB2Q08289 660 aaPredicted RBP19.85■□□□□ 0.77
LIN28B-202ENST00000635857 TRIM32Q13049 653 aa19.85■□□□□ 0.77
LIN28B-202ENST00000635857 CTCFLQ8NI51 663 aaPredicted RBP19.85■□□□□ 0.77
LIN28B-202ENST00000635857 U2AF1L4Q8WU68 220 aaKnown RBP19.85■□□□□ 0.77
LIN28B-202ENST00000635857 MAML3Q96JK9 1138 aa19.85■□□□□ 0.77
LIN28B-202ENST00000635857 UBA5Q9GZZ9 404 aa19.85■□□□□ 0.77
LIN28B-202ENST00000635857 PAK6Q9NQU5 681 aaPredicted RBP19.85■□□□□ 0.77
LIN28B-202ENST00000635857 WDR19Q8NEZ3 1342 aa19.84■□□□□ 0.77
LIN28B-202ENST00000635857 SGPL1O95470 568 aa19.84■□□□□ 0.77
LIN28B-202ENST00000635857 CNGA1P29973 690 aa19.84■□□□□ 0.77
LIN28B-202ENST00000635857 FGD1P98174 961 aa19.84■□□□□ 0.77
LIN28B-202ENST00000635857 CDC37Q16543 378 aaPredicted RBP19.84■□□□□ 0.77
LIN28B-202ENST00000635857 SYNE3Q6ZMZ3 975 aa19.84■□□□□ 0.77
LIN28B-202ENST00000635857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.84■□□□□ 0.77
LIN28B-202ENST00000635857 NUP133Q8WUM0 1156 aa19.84■□□□□ 0.77
LIN28B-202ENST00000635857 FLRT1Q9NZU1 646 aa19.84■□□□□ 0.77
LIN28B-202ENST00000635857 MYH6P13533 1939 aa19.84■□□□□ 0.77
LIN28B-202ENST00000635857 KIAA0100Q14667 2235 aaKnown RBP19.83■□□□□ 0.77
LIN28B-202ENST00000635857 KLRF2D3W0D1 207 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 EPB41L2O43491 1005 aaKnown RBP19.83■□□□□ 0.77
LIN28B-202ENST00000635857 DDAH1O94760 285 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 CALM1P0DP23 149 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 CALM2P0DP24 149 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 CALM3P0DP25 149 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 KIF5BP33176 963 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 CYP2C19P33261 490 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 MAP3K21Q5TCX8 1036 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 NSMFQ6X4W1 530 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 IGDCC4Q8TDY8 1250 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 CNPY2Q9Y2B0 182 aa19.83■□□□□ 0.77
LIN28B-202ENST00000635857 POTEB2H3BUK9 544 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 SH2B2O14492 632 aaPredicted RBP19.82■□□□□ 0.76
LIN28B-202ENST00000635857 MSCO60682 206 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 LIFRP42702 1097 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 GRM4Q14833 912 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 ZNF792Q3KQV3 632 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 TSGA10IPQ3SY00 556 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 ADGRF4Q8IZF3 695 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 ZNF654Q8IZM8 581 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 MSL3Q8N5Y2 521 aaKnown RBP19.82■□□□□ 0.76
LIN28B-202ENST00000635857 LY9Q9HBG7 655 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 VAT1LQ9HCJ6 419 aa19.82■□□□□ 0.76
LIN28B-202ENST00000635857 HSPA4P34932 840 aa19.81■□□□□ 0.76
LIN28B-202ENST00000635857 TRAF1Q13077 416 aa19.81■□□□□ 0.76
LIN28B-202ENST00000635857 USH1GQ495M9 461 aa19.81■□□□□ 0.76
LIN28B-202ENST00000635857 DHX32Q7L7V1 743 aaKnown RBP19.81■□□□□ 0.76
LIN28B-202ENST00000635857 TINF2Q9BSI4 451 aa19.81■□□□□ 0.76
LIN28B-202ENST00000635857 CPVLQ9H3G5 476 aa19.81■□□□□ 0.76
LIN28B-202ENST00000635857 A1CFQ9NQ94 594 aaKnown RBP19.81■□□□□ 0.76
LIN28B-202ENST00000635857 MAD2L2Q9UI95 211 aa19.81■□□□□ 0.76
LIN28B-202ENST00000635857 SLC12A7Q9Y666 1083 aa19.81■□□□□ 0.76
LIN28B-202ENST00000635857 PTPDC1A2A3K4 754 aa19.8■□□□□ 0.76
LIN28B-202ENST00000635857 PALM3A6NDB9 673 aaPredicted RBP19.8■□□□□ 0.76
LIN28B-202ENST00000635857 PSMA5P28066 241 aa19.8■□□□□ 0.76
LIN28B-202ENST00000635857 CCND3P30281 292 aaPredicted RBP19.8■□□□□ 0.76
LIN28B-202ENST00000635857 TROAPQ12815 778 aa19.8■□□□□ 0.76
LIN28B-202ENST00000635857 ZNF467Q7Z7K2 595 aaPredicted RBP19.8■□□□□ 0.76
LIN28B-202ENST00000635857 STAG2Q8N3U4 1231 aa19.8■□□□□ 0.76
LIN28B-202ENST00000635857 MPHOSPH6Q99547 160 aaKnown RBP19.8■□□□□ 0.76
LIN28B-202ENST00000635857 MAP3K14Q99558 947 aa19.8■□□□□ 0.76
LIN28B-202ENST00000635857 LRRC2Q9BYS8 371 aa19.8■□□□□ 0.76
LIN28B-202ENST00000635857 SENP2Q9HC62 589 aa19.8■□□□□ 0.76
LIN28B-202ENST00000635857 NRBP1Q9UHY1 535 aa19.8■□□□□ 0.76
LIN28B-202ENST00000635857 ABCB11O95342 1321 aa19.79■□□□□ 0.76
LIN28B-202ENST00000635857 SYNGAP1Q96PV0 1343 aa19.79■□□□□ 0.76
LIN28B-202ENST00000635857 FARP2O94887 1054 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms