RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 CMTR1Q8N1G2 835 aaKnown RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 PPP1R9AQ9ULJ8 1098 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 SSH2Q76I76 1423 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 EDC4Q6P2E9 1401 aaKnown RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 RPN1P04843 607 aaKnown RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 PIK3CAP42336 1068 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 TECP42680 631 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 DEPTORQ8TB45 409 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 HDAC11Q96DB2 347 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 GUCY2DQ02846 1103 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 ZNF277Q9NRM2 450 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 PANK4Q9NVE7 773 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 USP19O94966 1318 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 PDE8AO60658 829 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 EHHADHQ08426 723 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 KCTD16Q68DU8 428 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 POLR1AO95602 1720 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 SUCLG2Q96I99 432 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 ZNF408Q9H9D4 720 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 DDX25Q9UHL0 483 aaKnown RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 WDR62O43379 1518 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 CCT5P48643 541 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 INPP1P49441 399 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 ORC6Q9Y5N6 252 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 OATP04181 439 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 IFT88Q13099 833 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 SCYL2Q6P3W7 929 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 CCNL1Q9UK58 526 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 SYNJ2BP-COX16A0A087WUM0 186 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 ESYT2A0FGR8 921 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 SUN1O94901 812 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 ECE1P42892 770 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 PPARAQ07869 468 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 TMTC4Q5T4D3 741 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 NME8Q8N427 588 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 UHMK1Q8TAS1 419 aaKnown RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 GPKOWQ92917 476 aaPredicted RBP eCLIP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 COX16Q9P0S2 106 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 BLMP54132 1417 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-218ENST00000635120 ABCA5Q8WWZ7 1642 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 ZNF827Q17R98 1081 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 LRRC8CQ8TDW0 803 aa9.97□□□□□ -0.81
CSMD1-218ENST00000635120 RFX1P22670 979 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 ARHGEF16Q5VV41 709 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 ADALQ6DHV7 355 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 ZSCAN10Q96SZ4 725 aaPredicted RBP9.96□□□□□ -0.81
CSMD1-218ENST00000635120 MAD1L1Q9Y6D9 718 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 TTBK2Q6IQ55 1244 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 OTUD6AQ7L8S5 288 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 ADCY9O60503 1353 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 RINT1Q6NUQ1 792 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 NLRX1Q86UT6 975 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 LPIN2Q92539 896 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 IP6K1Q92551 441 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 IWS1Q96ST2 819 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 MMS19Q96T76 1030 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 MYO18AQ92614 2054 aaKnown RBP9.96□□□□□ -0.81
CSMD1-218ENST00000635120 CAPN9O14815 690 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 PARP10Q53GL7 1025 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 SPOUT1Q5T280 376 aaKnown RBP9.96□□□□□ -0.81
CSMD1-218ENST00000635120 HACE1Q8IYU2 909 aa9.96□□□□□ -0.81
CSMD1-218ENST00000635120 TRIM56Q9BRZ2 755 aaKnown RBP9.96□□□□□ -0.81
CSMD1-218ENST00000635120 MORC4Q8TE76 937 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 LRGUKQ96M69 825 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 SH3BGRP55822 239 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-218ENST00000635120 TSTA3Q13630 321 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-218ENST00000635120 NAA35Q5VZE5 725 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 FAM178BQ8IXR5 827 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 CD2APQ9Y5K6 639 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 YWHAGP61981 247 aaKnown RBP eCLIP9.96□□□□□ -0.82
CSMD1-218ENST00000635120 BCAS4Q8TDM0 211 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 EPS15L1Q9UBC2 864 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 MAP3K19Q56UN5 1328 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 MYSM1Q5VVJ2 828 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 CCDC68Q9H2F9 335 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 ABL1P00519 1130 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 BRD2P25440 801 aaKnown RBP9.96□□□□□ -0.82
CSMD1-218ENST00000635120 ZKSCAN8Q15776 578 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-218ENST00000635120 LRRC8AQ8IWT6 810 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 FANCLQ9NW38 375 aa9.96□□□□□ -0.82
CSMD1-218ENST00000635120 LIG4P49917 911 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 CCDC197Q8NCU1 140 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 HOOK2Q96ED9 719 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 PPME1Q9Y570 386 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 DPP8Q6V1X1 898 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-218ENST00000635120 BLIDQ8IZY5 108 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 PSTPIP2Q9H939 334 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 SHROOM2Q13796 1616 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 CITO14578 2027 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 A0A0D9SFI3 127 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 IFNAR2P48551 515 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 KIF11P52732 1056 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 TEKT1Q969V4 418 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 SLC39A2Q9NP94 309 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 ZAP70P43403 619 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 RNF169Q8NCN4 708 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 MYH8P13535 1937 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-218ENST00000635120 TFAP4Q01664 338 aa9.95□□□□□ -0.82
CSMD1-218ENST00000635120 GCKRQ14397 625 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms