RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 NONOQ15233 471 aaKnown RBP eCLIP24.48■■□□□ 1.51
SPAST-204ENST00000621856 INF2Q27J81 1249 aa24.48■■□□□ 1.51
SPAST-204ENST00000621856 SPECC1Q5M775 1068 aa24.48■■□□□ 1.51
SPAST-204ENST00000621856 APOBEC3FQ8IUX4 373 aaKnown RBP24.48■■□□□ 1.51
SPAST-204ENST00000621856 SPICE1Q8N0Z3 855 aa24.48■■□□□ 1.51
SPAST-204ENST00000621856 REXO1Q8N1G1 1221 aaKnown RBP24.48■■□□□ 1.51
SPAST-204ENST00000621856 TRPM4Q8TD43 1214 aa24.48■■□□□ 1.51
SPAST-204ENST00000621856 FERMT2Q96AC1 680 aa24.48■■□□□ 1.51
SPAST-204ENST00000621856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.47■■□□□ 1.51
SPAST-204ENST00000621856 TMEM232C9JQI7 657 aa24.47■■□□□ 1.51
SPAST-204ENST00000621856 ATP2C1P98194 919 aaPredicted RBP24.47■■□□□ 1.51
SPAST-204ENST00000621856 CDC37Q16543 378 aaPredicted RBP24.47■■□□□ 1.51
SPAST-204ENST00000621856 QRICH1Q2TAL8 776 aa24.47■■□□□ 1.51
SPAST-204ENST00000621856 SYDE2Q5VT97 1194 aa24.47■■□□□ 1.51
SPAST-204ENST00000621856 RNF181Q9P0P0 153 aa24.47■■□□□ 1.51
SPAST-204ENST00000621856 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.47■■□□□ 1.51
SPAST-204ENST00000621856 ANGEL2Q5VTE6 544 aaKnown RBP24.47■■□□□ 1.51
SPAST-204ENST00000621856 CSRNP2Q9H175 543 aa24.47■■□□□ 1.51
SPAST-204ENST00000621856 BIN2Q9UBW5 565 aaPredicted RBP24.47■■□□□ 1.51
SPAST-204ENST00000621856 KCNH3Q9ULD8 1083 aa24.47■■□□□ 1.51
SPAST-204ENST00000621856 PHF20L1A8MW92 1017 aa24.46■■□□□ 1.51
SPAST-204ENST00000621856 JAKMIP3Q5VZ66 844 aa24.46■■□□□ 1.51
SPAST-204ENST00000621856 TIGD1Q96MW7 591 aa24.46■■□□□ 1.51
SPAST-204ENST00000621856 RIC8AQ9NPQ8 531 aa24.45■■□□□ 1.5
SPAST-204ENST00000621856 TMEM260Q9NX78 707 aa24.45■■□□□ 1.5
SPAST-204ENST00000621856 YBX3P16989 372 aaKnown RBP eCLIP24.44■■□□□ 1.5
SPAST-204ENST00000621856 EPS15P42566 896 aa24.44■■□□□ 1.5
SPAST-204ENST00000621856 ZYXQ15942 572 aaKnown RBP24.44■■□□□ 1.5
SPAST-204ENST00000621856 NBPF12Q5TAG4 269 aaPredicted RBP24.44■■□□□ 1.5
SPAST-204ENST00000621856 CUL5Q93034 780 aa24.44■■□□□ 1.5
SPAST-204ENST00000621856 VCPKMTQ9H867 229 aa24.44■■□□□ 1.5
SPAST-204ENST00000621856 DCAF15Q66K64 600 aa24.44■■□□□ 1.5
SPAST-204ENST00000621856 BTNL9Q6UXG8 535 aa24.44■■□□□ 1.5
SPAST-204ENST00000621856 VWA3AA6NCI4 1184 aa24.43■■□□□ 1.5
SPAST-204ENST00000621856 MRPL12P52815 198 aaKnown RBP24.43■■□□□ 1.5
SPAST-204ENST00000621856 KIAA1755Q5JYT7 1200 aa24.43■■□□□ 1.5
SPAST-204ENST00000621856 FAM83BQ5T0W9 1011 aa24.43■■□□□ 1.5
SPAST-204ENST00000621856 CCDC84Q86UT8 332 aaPredicted RBP24.43■■□□□ 1.5
SPAST-204ENST00000621856 HOOK2Q96ED9 719 aa24.43■■□□□ 1.5
SPAST-204ENST00000621856 FEZ1Q99689 392 aa24.43■■□□□ 1.5
SPAST-204ENST00000621856 GGA3Q9NZ52 723 aa24.43■■□□□ 1.5
SPAST-204ENST00000621856 PCDHA1Q9Y5I3 950 aa24.43■■□□□ 1.5
SPAST-204ENST00000621856 DDNO94850 711 aaPredicted RBP24.42■■□□□ 1.5
SPAST-204ENST00000621856 SNAP25P60880 206 aa24.42■■□□□ 1.5
SPAST-204ENST00000621856 ANO6Q4KMQ2 910 aa24.42■■□□□ 1.5
SPAST-204ENST00000621856 NEK8Q86SG6 692 aa24.42■■□□□ 1.5
SPAST-204ENST00000621856 GINM1Q9NU53 330 aa24.42■■□□□ 1.5
SPAST-204ENST00000621856 CTNND1O60716 968 aaKnown RBP24.41■■□□□ 1.5
SPAST-204ENST00000621856 LMOD1P29536 600 aaPredicted RBP24.41■■□□□ 1.5
SPAST-204ENST00000621856 STAT2P52630 851 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 STX1AQ16623 288 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 LETM2Q2VYF4 491 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 UVSSAQ2YD98 709 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 ARL6IP4Q66PJ3 421 aaKnown RBP24.41■■□□□ 1.5
SPAST-204ENST00000621856 FBXO11Q86XK2 927 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 TBCKQ8TEA7 893 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 AMNQ9BXJ7 453 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 ZNF341Q9BYN7 854 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 PSTPIP2Q9H939 334 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 UBE2SQ16763 222 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 KRBA2Q6ZNG9 492 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 C4orf32Q8N8J7 132 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 CNNM3Q8NE01 707 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 ERCC4Q92889 916 aaPredicted RBP24.41■■□□□ 1.5
SPAST-204ENST00000621856 GLIS2Q9BZE0 524 aaPredicted RBP24.41■■□□□ 1.5
SPAST-204ENST00000621856 GLT8D2Q9H1C3 349 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 PRR12Q9ULL5 1215 aa24.41■■□□□ 1.5
SPAST-204ENST00000621856 POLR2DO15514 142 aaKnown RBP24.4■■□□□ 1.5
SPAST-204ENST00000621856 CCNT1O60563 726 aaKnown RBP24.4■■□□□ 1.5
SPAST-204ENST00000621856 ZRSR1Q15695 479 aaKnown RBP24.4■■□□□ 1.5
SPAST-204ENST00000621856 LONRF3Q496Y0 759 aa24.4■■□□□ 1.5
SPAST-204ENST00000621856 C9orf131Q5VYM1 1079 aa24.4■■□□□ 1.5
SPAST-204ENST00000621856 USP49Q70CQ1 688 aa24.4■■□□□ 1.5
SPAST-204ENST00000621856 FAM200AQ8TCP9 573 aa24.4■■□□□ 1.5
SPAST-204ENST00000621856 KIAA1468Q9P260 1216 aa24.4■■□□□ 1.5
SPAST-204ENST00000621856 HIRAP54198 1017 aaPredicted RBP24.39■■□□□ 1.5
SPAST-204ENST00000621856 CHURC1Q8WUH1 139 aa24.39■■□□□ 1.5
SPAST-204ENST00000621856 SYMPKQ92797 1274 aaKnown RBP24.39■■□□□ 1.5
SPAST-204ENST00000621856 DOCK1Q14185 1865 aa24.39■■□□□ 1.49
SPAST-204ENST00000621856 PRAMEF18Q5VWM3 479 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 PDILTQ8N807 584 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 EPSTI1Q96J88 318 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 DNAJC25Q9H1X3 360 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 ANO10Q9NW15 660 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 HOOK1Q9UJC3 728 aaKnown RBP24.38■■□□□ 1.49
SPAST-204ENST00000621856 PPP2R3BQ9Y5P8 575 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 LAD1O00515 517 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 INPP5BP32019 993 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 CLK2P49760 499 aaKnown RBP24.38■■□□□ 1.49
SPAST-204ENST00000621856 CCDC173Q0VFZ6 552 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 USH1GQ495M9 461 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 TMEM60Q9H2L4 133 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 SERTAD1Q9UHV2 236 aa24.38■■□□□ 1.49
SPAST-204ENST00000621856 IL17AQ16552 155 aa24.37■■□□□ 1.49
SPAST-204ENST00000621856 DTHD1Q6ZMT9 781 aa24.37■■□□□ 1.49
SPAST-204ENST00000621856 ILDR2Q71H61 639 aa24.37■■□□□ 1.49
SPAST-204ENST00000621856 FAM160B2Q86V87 743 aa24.37■■□□□ 1.49
SPAST-204ENST00000621856 KIFC2Q96AC6 838 aa24.37■■□□□ 1.49
SPAST-204ENST00000621856 ADARB2Q9NS39 739 aaKnown RBP24.37■■□□□ 1.49
SPAST-204ENST00000621856 NEMFO60524 1076 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms