RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 FGD4Q96M96 766 aa20.25■□□□□ 0.83
HMGN3-203ENST00000620514 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
HMGN3-203ENST00000620514 NRBP1Q9UHY1 535 aa20.25■□□□□ 0.83
HMGN3-203ENST00000620514 SMCHD1A6NHR9 2005 aa20.24■□□□□ 0.83
HMGN3-203ENST00000620514 ZNF213O14771 459 aa20.24■□□□□ 0.83
HMGN3-203ENST00000620514 SNAI1O95863 264 aaPredicted RBP20.24■□□□□ 0.83
HMGN3-203ENST00000620514 SLC16A2P36021 539 aa20.24■□□□□ 0.83
HMGN3-203ENST00000620514 LRRC41Q15345 812 aa20.24■□□□□ 0.83
HMGN3-203ENST00000620514 LENG1Q96BZ8 264 aaPredicted RBP20.24■□□□□ 0.83
HMGN3-203ENST00000620514 RNF146Q9NTX7 359 aa20.24■□□□□ 0.83
HMGN3-203ENST00000620514 FRMPD2Q68DX3 1309 aaPredicted RBP20.24■□□□□ 0.83
HMGN3-203ENST00000620514 KBTBD13C9JR72 458 aa20.23■□□□□ 0.83
HMGN3-203ENST00000620514 PCP11498 1178 aaKnown RBP20.23■□□□□ 0.83
HMGN3-203ENST00000620514 MAMDC4Q6UXC1 1216 aa20.23■□□□□ 0.83
HMGN3-203ENST00000620514 GDF15Q99988 308 aa20.23■□□□□ 0.83
HMGN3-203ENST00000620514 ZKSCAN3Q9BRR0 538 aa20.23■□□□□ 0.83
HMGN3-203ENST00000620514 RNF41Q9H4P4 317 aaPredicted RBP20.23■□□□□ 0.83
HMGN3-203ENST00000620514 ACAD9Q9H845 621 aa20.23■□□□□ 0.83
HMGN3-203ENST00000620514 XPNPEP3Q9NQH7 507 aa20.23■□□□□ 0.83
HMGN3-203ENST00000620514 CNPY2Q9Y2B0 182 aa20.23■□□□□ 0.83
HMGN3-203ENST00000620514 SYNGAP1Q96PV0 1343 aa20.23■□□□□ 0.83
HMGN3-203ENST00000620514 PGK1P00558 417 aa20.22■□□□□ 0.83
HMGN3-203ENST00000620514 RARBP10826 455 aa20.22■□□□□ 0.83
HMGN3-203ENST00000620514 ALAS1P13196 640 aa20.22■□□□□ 0.83
HMGN3-203ENST00000620514 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
HMGN3-203ENST00000620514 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
HMGN3-203ENST00000620514 TRERF1Q96PN7 1200 aa20.22■□□□□ 0.83
HMGN3-203ENST00000620514 DSCC1Q9BVC3 393 aa20.22■□□□□ 0.83
HMGN3-203ENST00000620514 GPCPD1Q9NPB8 672 aa20.22■□□□□ 0.83
HMGN3-203ENST00000620514 ZHX1Q9UKY1 873 aaPredicted RBP20.22■□□□□ 0.83
HMGN3-203ENST00000620514 LAMA4Q16363 1823 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 RANBP2P49792 3224 aaKnown RBP20.21■□□□□ 0.83
HMGN3-203ENST00000620514 PDHBP11177 359 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 AKR1A1P14550 325 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 ADCYAP1R1P41586 468 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 MAGEA10P43363 369 aaPredicted RBP20.21■□□□□ 0.83
HMGN3-203ENST00000620514 TKFCQ3LXA3 575 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 MUM1L1Q5H9M0 696 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 BTNL9Q6UXG8 535 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 ZNF467Q7Z7K2 595 aaPredicted RBP20.21■□□□□ 0.83
HMGN3-203ENST00000620514 ESR2Q92731 530 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 FERMT2Q96AC1 680 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 TTC14Q96N46 770 aa20.21■□□□□ 0.83
HMGN3-203ENST00000620514 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
HMGN3-203ENST00000620514 A1CFQ9NQ94 594 aaKnown RBP20.21■□□□□ 0.83
HMGN3-203ENST00000620514 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.21■□□□□ 0.83
HMGN3-203ENST00000620514 POTEB2H3BUK9 544 aa20.2■□□□□ 0.82
HMGN3-203ENST00000620514 KDM4AO75164 1064 aa20.2■□□□□ 0.82
HMGN3-203ENST00000620514 RTP1P59025 263 aa20.2■□□□□ 0.82
HMGN3-203ENST00000620514 SYDE2Q5VT97 1194 aa20.2■□□□□ 0.82
HMGN3-203ENST00000620514 FAM133AQ8N9E0 248 aa20.2■□□□□ 0.82
HMGN3-203ENST00000620514 CCPG1Q9ULG6 757 aa20.2■□□□□ 0.82
HMGN3-203ENST00000620514 SOWAHBA6NEL2 793 aa20.19■□□□□ 0.82
HMGN3-203ENST00000620514 B4E1Z4 1266 aa20.19■□□□□ 0.82
HMGN3-203ENST00000620514 SLC39A5Q6ZMH5 540 aa20.19■□□□□ 0.82
HMGN3-203ENST00000620514 ARMCX2Q7L311 632 aa20.19■□□□□ 0.82
HMGN3-203ENST00000620514 FAM184BQ9ULE4 1060 aa20.19■□□□□ 0.82
HMGN3-203ENST00000620514 ATP11BQ9Y2G3 1177 aa20.19■□□□□ 0.82
HMGN3-203ENST00000620514 MCM3APO60318 1980 aa20.19■□□□□ 0.82
HMGN3-203ENST00000620514 ICAM1P05362 532 aa20.18■□□□□ 0.82
HMGN3-203ENST00000620514 BMP8BP34820 402 aa20.18■□□□□ 0.82
HMGN3-203ENST00000620514 ZNF543Q08ER8 600 aa20.18■□□□□ 0.82
HMGN3-203ENST00000620514 ACVR2BQ13705 512 aa20.18■□□□□ 0.82
HMGN3-203ENST00000620514 IMMTQ16891 758 aaKnown RBP20.18■□□□□ 0.82
HMGN3-203ENST00000620514 CCDC144CPQ8IYA2 1237 aa20.18■□□□□ 0.82
HMGN3-203ENST00000620514 PHF24Q9UPV7 400 aa20.18■□□□□ 0.82
HMGN3-203ENST00000620514 DDX49Q9Y6V7 483 aaKnown RBP20.18■□□□□ 0.82
HMGN3-203ENST00000620514 A0A1W2PPC1 479 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 ADCY6O43306 1168 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 ADAMTS4O75173 837 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 SNHG28P0DPA3 235 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 IRX5P78411 483 aaPredicted RBP20.17■□□□□ 0.82
HMGN3-203ENST00000620514 MDM2Q00987 491 aaPredicted RBP20.17■□□□□ 0.82
HMGN3-203ENST00000620514 TRIM60Q495X7 471 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 RNF180Q86T96 592 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 DGKHQ86XP1 1220 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 KATNBL1Q9H079 304 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 CYP39A1Q9NYL5 469 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 CTNNA3Q9UI47 895 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 ASTN1O14525 1302 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 SYNRGQ9UMZ2 1314 aa20.17■□□□□ 0.82
HMGN3-203ENST00000620514 SOX1O00570 391 aaPredicted RBP20.16■□□□□ 0.82
HMGN3-203ENST00000620514 GOLGA8HP0CJ92 632 aa20.16■□□□□ 0.82
HMGN3-203ENST00000620514 CHMLP26374 656 aa20.16■□□□□ 0.82
HMGN3-203ENST00000620514 SNX17Q15036 470 aa20.16■□□□□ 0.82
HMGN3-203ENST00000620514 NSMFQ6X4W1 530 aa20.16■□□□□ 0.82
HMGN3-203ENST00000620514 PURBQ96QR8 312 aaKnown RBP20.16■□□□□ 0.82
HMGN3-203ENST00000620514 CPVLQ9H3G5 476 aa20.16■□□□□ 0.82
HMGN3-203ENST00000620514 ABHD16BQ9H3Z7 469 aa20.16■□□□□ 0.82
HMGN3-203ENST00000620514 ZSWIM5Q9P217 1185 aa20.16■□□□□ 0.82
HMGN3-203ENST00000620514 MYADML2A6NDP7 307 aa20.15■□□□□ 0.82
HMGN3-203ENST00000620514 CCDC144BQ3MJ40 725 aa20.15■□□□□ 0.82
HMGN3-203ENST00000620514 IQCA1Q86XH1 822 aa20.15■□□□□ 0.82
HMGN3-203ENST00000620514 ZSCAN10Q96SZ4 725 aaPredicted RBP20.15■□□□□ 0.82
HMGN3-203ENST00000620514 UBE2OQ9C0C9 1292 aaKnown RBP20.15■□□□□ 0.82
HMGN3-203ENST00000620514 RAD50Q92878 1312 aa20.15■□□□□ 0.82
HMGN3-203ENST00000620514 A0A1W2PQ45 241 aaPredicted RBP20.14■□□□□ 0.81
HMGN3-203ENST00000620514 A0A1W2PQY0 241 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 NFIBO00712 420 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 DUSP11O75319 330 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms