RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TMEM232C9JQI7 657 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 ZNF536O15090 1300 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 RAD21O60216 631 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 ADCY3O60266 1144 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 FLOT1O75955 427 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 COL11A1P12107 1806 aaPredicted RBP6.12□□□□□ -1.43
SHMT1-211ENST00000618902 BMP3P12645 472 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 RXRAP19793 462 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 RPS6KB1P23443 525 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 MCM5P33992 734 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 SLC16A2P36021 539 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 FLT3LGP49771 235 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 TROAPQ12815 778 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 TRDNQ13061 729 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 TOB2Q14106 344 aaPredicted RBP6.12□□□□□ -1.43
SHMT1-211ENST00000618902 GRB14Q14449 540 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 TMEM132BQ14DG7 1078 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 TKFCQ3LXA3 575 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 IFIT1BQ5T764 474 aaKnown RBP6.12□□□□□ -1.43
SHMT1-211ENST00000618902 RNF20Q5VTR2 975 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 OLFML2BQ68BL8 750 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 FRMPD2Q68DX3 1309 aaPredicted RBP6.12□□□□□ -1.43
SHMT1-211ENST00000618902 BTNL9Q6UXG8 535 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 DHX32Q7L7V1 743 aaKnown RBP6.12□□□□□ -1.43
SHMT1-211ENST00000618902 IQCA1Q86XH1 822 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 HSCBQ8IWL3 235 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 RPTORQ8N122 1335 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 DCAF4Q8WV16 495 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 USP6NLQ92738 828 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 APBA2Q99767 749 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 LARP6Q9BRS8 491 aaKnown RBP6.12□□□□□ -1.43
SHMT1-211ENST00000618902 UBAC1Q9BSL1 405 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 PAGR1Q9BTK6 254 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 AGXT2Q9BYV1 514 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 GPCPD1Q9NPB8 672 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 PAK6Q9NQU5 681 aaPredicted RBP6.12□□□□□ -1.43
SHMT1-211ENST00000618902 FAM217BQ9NTX9 383 aaPredicted RBP6.12□□□□□ -1.43
SHMT1-211ENST00000618902 MAD2L2Q9UI95 211 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 GJD2Q9UKL4 321 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 RIPK3Q9Y572 518 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 PTCH2Q9Y6C5 1203 aa6.12□□□□□ -1.43
SHMT1-211ENST00000618902 WDR19Q8NEZ3 1342 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 VWA5AO00534 786 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 CYTH3O43739 400 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 DTNBO60941 627 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 PLEKHA8P1O95397 391 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 ZKSCAN1P17029 563 aaPredicted RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 CASTP20810 708 aaKnown RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 LIFRP42702 1097 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SLC1A4P43007 532 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 STAT2P52630 851 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 PRKCZQ05513 592 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 APOBRQ0VD83 1088 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 MAP2K5Q13163 448 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 KRT32Q14532 448 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 GRM4Q14833 912 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 WTAPQ15007 396 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 CCDC96Q2M329 555 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 MORN1Q5T089 497 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 GPATCH4Q5T3I0 446 aaKnown RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 MAP3K21Q5TCX8 1036 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SYDE2Q5VT97 1194 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 MFSD14CQ5VZR4 134 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 Q6ZUG5 572 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 ZNF467Q7Z7K2 595 aaPredicted RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SGMS1Q86VZ5 419 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 ZNF654Q8IZM8 581 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SAMD3Q8N6K7 520 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 CHST13Q8NET6 341 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 KIFC2Q96AC6 838 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 TMEM87BQ96K49 555 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 GBP4Q96PP9 640 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SLF1Q9BQI6 1058 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 HTATIP2Q9BUP3 242 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 MOV10L1Q9BXT6 1211 aaKnown RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 TEX13BQ9BXU2 312 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SEZ6LQ9BYH1 1024 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 TM6SF1Q9BZW5 370 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 UBA5Q9GZZ9 404 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SPATC1LQ9H0A9 340 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 KAT14Q9H8E8 782 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SLC38A10Q9HBR0 1119 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 CWC22Q9HCG8 908 aaKnown RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 HMX1Q9NP08 348 aaPredicted RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 ZNF214Q9UL59 606 aaPredicted RBP6.11□□□□□ -1.43
SHMT1-211ENST00000618902 PRR12Q9ULL5 1215 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 SZT2Q5T011 3432 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 MGAMO43451 1857 aa6.11□□□□□ -1.43
SHMT1-211ENST00000618902 B4DLN1 442 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 GOLGA6L22H0YM25 854 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 PPP1R11O60927 126 aaPredicted RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 ZBED4O75132 1171 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 LARGE1O95461 756 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 SGPL1O95470 568 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 FCER1AP12319 257 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 PTPREP23469 700 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 CDC27P30260 824 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 STAT3P40763 770 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 MRPL12P52815 198 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms