RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 JMYQ8N9B5 988 aa5.37□□□□□ -1.55
SYCP1-210ENST00000618516 PRPF38AQ8NAV1 312 aaKnown RBP5.37□□□□□ -1.55
SYCP1-210ENST00000618516 SLC26A6Q9BXS9 759 aa5.37□□□□□ -1.55
SYCP1-210ENST00000618516 USP26Q9BXU7 913 aa5.37□□□□□ -1.55
SYCP1-210ENST00000618516 HOXC10Q9NYD6 342 aa5.37□□□□□ -1.55
SYCP1-210ENST00000618516 BRPF3Q9ULD4 1205 aa5.37□□□□□ -1.55
SYCP1-210ENST00000618516 CYP46A1Q9Y6A2 500 aa5.37□□□□□ -1.55
SYCP1-210ENST00000618516 WDR87Q6ZQQ6 2873 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 ZNF646O15015 1829 aaPredicted RBP5.36□□□□□ -1.55
SYCP1-210ENST00000618516 SMCHD1A6NHR9 2005 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 MUC3AQ02505 3323 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 CDC37Q16543 378 aaPredicted RBP5.36□□□□□ -1.55
SYCP1-210ENST00000618516 TMEM63BQ5T3F8 832 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 CCDC83Q8IWF9 413 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 ABHD8Q96I13 439 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 TRERF1Q96PN7 1200 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 CNNM2Q9H8M5 875 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 CUL9Q8IWT3 2517 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 TRPM7Q96QT4 1865 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 POTEFA5A3E0 1075 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 ZBTB43O43298 467 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 LARGE1O95461 756 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 PGK1P00558 417 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 PRKAR2AP13861 404 aaKnown RBP5.36□□□□□ -1.55
SYCP1-210ENST00000618516 GRK4P32298 578 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 METAP2P50579 478 aaKnown RBP eCLIP5.36□□□□□ -1.55
SYCP1-210ENST00000618516 AKAP17AQ02040 695 aaKnown RBP5.36□□□□□ -1.55
SYCP1-210ENST00000618516 BAATQ14032 418 aaPredicted RBP5.36□□□□□ -1.55
SYCP1-210ENST00000618516 NOL9Q5SY16 702 aaKnown RBP5.36□□□□□ -1.55
SYCP1-210ENST00000618516 SYDE2Q5VT97 1194 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 ANKRD23Q86SG2 305 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 MMP19Q99542 508 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 NUDT12Q9BQG2 462 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 WDR18Q9BV38 432 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 DAXXQ9UER7 740 aaPredicted RBP5.36□□□□□ -1.55
SYCP1-210ENST00000618516 PPP1R9AQ9ULJ8 1098 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 PCDHA1Q9Y5I3 950 aa5.36□□□□□ -1.55
SYCP1-210ENST00000618516 SPTBN5Q9NRC6 3674 aaKnown RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 CHD7Q9P2D1 2997 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 ECM29Q5VYK3 1845 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 DDX39AO00148 427 aaKnown RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 WDR46O15213 610 aaKnown RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 FCER1AP12319 257 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 CDC27P30260 824 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 QRICH1Q2TAL8 776 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 C17orf99Q6UX52 265 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 SEPT14Q6ZU15 432 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 DHX32Q7L7V1 743 aaKnown RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 CTU1Q7Z7A3 348 aaKnown RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 MB21D2Q8IYB1 491 aaPredicted RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 PROCA1Q8NCQ7 364 aaPredicted RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 ERO1AQ96HE7 468 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 HHIPL1Q96JK4 782 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 UNC93B1Q9H1C4 597 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 LY9Q9HBG7 655 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 NYAP2Q9P242 653 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 SEC63Q9UGP8 760 aaKnown RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 HPS5Q9UPZ3 1129 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 MYO7AQ13402 2215 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 ORC4O43929 436 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 TFRCP02786 760 aaKnown RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 INHAP05111 366 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 AK2P54819 239 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 CCNA1P78396 465 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 RTN1Q16799 776 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 JAKMIP3Q5VZ66 844 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 MCTP1Q6DN14 999 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 FBXO16Q8IX29 292 aaPredicted RBP5.35□□□□□ -1.55
SYCP1-210ENST00000618516 CHURC1Q8WUH1 139 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 TRIB2Q92519 343 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 GJA10Q969M2 543 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 TMEM106CQ9BVX2 250 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 TEX13BQ9BXU2 312 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 VPS54Q9P1Q0 977 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 PAPPA2Q9BXP8 1791 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 PSME4Q14997 1843 aa5.35□□□□□ -1.55
SYCP1-210ENST00000618516 TESPA1A2RU30 521 aaPredicted RBP5.34□□□□□ -1.55
SYCP1-210ENST00000618516 POTEB2H3BUK9 544 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 CYTH3O43739 400 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 JAK2O60674 1132 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 COBLO75128 1261 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 CD2BP2O95400 341 aaKnown RBP5.34□□□□□ -1.55
SYCP1-210ENST00000618516 CCND3P30281 292 aaPredicted RBP5.34□□□□□ -1.55
SYCP1-210ENST00000618516 HSPA4P34932 840 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 MAP3K10Q02779 954 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 ZNF543Q08ER8 600 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 ALX1Q15699 326 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 FAM110CQ1W6H9 321 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 APOA5Q6Q788 366 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 PLEKHH3Q7Z736 793 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 SRBD1Q8N5C6 995 aaKnown RBP5.34□□□□□ -1.55
SYCP1-210ENST00000618516 NPLOC4Q8TAT6 608 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 IGDCC4Q8TDY8 1250 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 LPAR1Q92633 364 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 SLKQ9H2G2 1235 aaPredicted RBP5.34□□□□□ -1.55
SYCP1-210ENST00000618516 KCNJ14Q9UNX9 436 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 ARAP2Q8WZ64 1704 aa5.34□□□□□ -1.55
SYCP1-210ENST00000618516 CSPG5O95196 566 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms