RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 CCDC122Q5T0U0 273 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 LEKR1Q6ZMV7 388 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 OTUD6AQ7L8S5 288 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 SMYD4Q8IYR2 804 aaPredicted RBP11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 MLKLQ8NB16 471 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 TMEM47Q9BQJ4 181 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 ZNF577Q9BSK1 485 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 REREQ9P2R6 1566 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 FMNL1O95466 1100 aaPredicted RBP11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L24Q0WX57 530 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 NOLC1Q14978 699 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 IFI16Q16666 785 aaKnown RBP11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L6PQ6QN14 398 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 MAATS1Q7Z4T9 603 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 MAP7D2Q96T17 732 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 LARSQ9P2J5 1176 aaKnown RBP11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 SEPT9Q9UHD8 586 aaPredicted RBP11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 EXOC7Q9UPT5 735 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 NEDD4P46934 1319 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 PDE4DIPQ5VU43 2346 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 GOLGA6L9A6NEM1 432 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 INO80B-WBP1J3KQ70 363 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 USP14P54578 494 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 LRRC41Q15345 812 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 GSTA5Q7RTV2 222 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 SP8Q8IXZ3 490 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 PLVAPQ9BX97 442 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 INO80BQ9C086 356 aaPredicted RBP11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 CSRNP2Q9H175 543 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 RAVER2Q9HCJ3 691 aaKnown RBP11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 TNFAIP3P21580 790 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 ODR4Q5SWX8 454 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 TMEM179Q6ZVK1 233 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 JAKMIP2Q96AA8 810 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 PIK3C2BO00750 1634 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 AKR1B15C9JRZ8 316 aaPredicted RBP11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 IFNAR1P17181 557 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 LIG4P49917 911 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 IFRD2Q12894 506 aaPredicted RBP11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 RASA3Q14644 834 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 SYT10Q6XYQ8 523 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 BARGINQ6ZT62 677 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 RNF34Q969K3 372 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 BAG1Q99933 345 aaPredicted RBP11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 SPOPO43791 374 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 CALUO43852 315 aaPredicted RBP11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 OTUD6BQ8N6M0 293 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
SMARCA1-205ENST00000617310 GOLGA6L10A0A0M3HER8 536 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 KRT83P78385 493 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 FAM26FQ5R3K3 315 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 CYB5R4Q7L1T6 521 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 EHBP1Q8NDI1 1231 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 FAM107BQ9H098 131 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 USTQ9Y2C2 406 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 PCDHA5Q9Y5H7 936 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 ERICH4A6NGS2 130 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 OSBPP22059 807 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 KLRK1P26718 216 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 COL23A1Q86Y22 540 aaPredicted RBP11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 CNGA4Q8IV77 575 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 NTSR2O95665 410 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 AKR1B1P15121 316 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 MYOCDQ8IZQ8 938 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 NACA2Q9H009 215 aa11.25□□□□□ -0.61
SMARCA1-205ENST00000617310 MROH7-TTC4A0A0A0MT08 1334 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 ABL1P00519 1130 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 CCDC25Q86WR0 208 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 ZNF668Q96K58 619 aaPredicted RBP11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 FERMT1Q9BQL6 677 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 FAM49AQ9H0Q0 323 aaPredicted RBP11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 PCDHA4Q9UN74 947 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 AKT3Q9Y243 479 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 RABGAP1Q9Y3P9 1069 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 NEXMIFQ5QGS0 1516 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 LMTK2Q8IWU2 1503 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 USP17L10C9JJH3 530 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 F5H6K3 240 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 HNRNPDLO14979 420 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms