RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 MTRQ99707 1265 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 RMND1Q9NWS8 449 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 PI4KBQ9UBF8 816 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 FAM198AQ9UFP1 575 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 COL2A1P02458 1487 aaPredicted RBP17.79■□□□□ 0.44
NR1H3-235ENST00000616973 PNMA6FA0A0J9YX94 578 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 DYNC1I1O14576 645 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 NRDCO43847 1150 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 OR52Z1P0C646 297 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
NR1H3-235ENST00000616973 CASP1P29466 404 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 STAT6P42226 847 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 MKL1Q969V6 931 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 DNAJC18Q9H819 358 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 SYNRGQ9UMZ2 1314 aa17.79■□□□□ 0.44
NR1H3-235ENST00000616973 CDK11BP21127 795 aaKnown RBP17.78■□□□□ 0.44
NR1H3-235ENST00000616973 GTF2F1P35269 517 aaKnown RBP eCLIP17.78■□□□□ 0.44
NR1H3-235ENST00000616973 UBA7P41226 1012 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 ADCY7P51828 1080 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 EIF6P56537 245 aaKnown RBP17.78■□□□□ 0.44
NR1H3-235ENST00000616973 KARSQ15046 597 aaKnown RBP17.78■□□□□ 0.44
NR1H3-235ENST00000616973 EZH2Q15910 746 aaKnown RBP17.78■□□□□ 0.44
NR1H3-235ENST00000616973 CLEC10AQ8IUN9 316 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 TRMT44Q8IYL2 757 aaKnown RBP17.78■□□□□ 0.44
NR1H3-235ENST00000616973 MTMR8Q96EF0 704 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 CUEDC2Q9H467 287 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 MAGEF1Q9HAY2 307 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 GPCPD1Q9NPB8 672 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 INTS13Q9NVM9 706 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 NYAP2Q9P242 653 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 TPD52L1Q16890 204 aaPredicted RBP17.78■□□□□ 0.44
NR1H3-235ENST00000616973 LETM2Q2VYF4 491 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 RRAGBQ5VZM2 374 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 CCDC112Q8NEF3 446 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 TBCKQ8TEA7 893 aa17.78■□□□□ 0.44
NR1H3-235ENST00000616973 DDTLA6NHG4 134 aaPredicted RBP17.77■□□□□ 0.44
NR1H3-235ENST00000616973 MPHOSPH10O00566 681 aaKnown RBP17.77■□□□□ 0.44
NR1H3-235ENST00000616973 CCNT1O60563 726 aaKnown RBP17.77■□□□□ 0.44
NR1H3-235ENST00000616973 RBM5P52756 815 aaKnown RBP eCLIP17.77■□□□□ 0.44
NR1H3-235ENST00000616973 AOC3Q16853 763 aa17.77■□□□□ 0.44
NR1H3-235ENST00000616973 NAALADL2Q58DX5 795 aa17.77■□□□□ 0.44
NR1H3-235ENST00000616973 ZNF658Q5TYW1 1059 aaPredicted RBP17.77■□□□□ 0.44
NR1H3-235ENST00000616973 TATDN1Q6P1N9 297 aa17.77■□□□□ 0.44
NR1H3-235ENST00000616973 CCAR2Q8N163 923 aaKnown RBP17.77■□□□□ 0.44
NR1H3-235ENST00000616973 SAMSN1Q9NSI8 373 aaKnown RBP17.77■□□□□ 0.44
NR1H3-235ENST00000616973 ATRNL1Q5VV63 1379 aa17.77■□□□□ 0.43
NR1H3-235ENST00000616973 MYH7BA7E2Y1 1941 aa17.77■□□□□ 0.43
NR1H3-235ENST00000616973 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 ENTPD3O75355 529 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 RPN1P04843 607 aaKnown RBP17.76■□□□□ 0.43
NR1H3-235ENST00000616973 TBX2Q13207 712 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-235ENST00000616973 CDKAL1Q5VV42 579 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 SH3BP5LQ7L8J4 393 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 STAMQ92783 540 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 BLZF1Q9H2G9 400 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 TMX1Q9H3N1 280 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 KANSL2Q9H9L4 492 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 RIC8AQ9NPQ8 531 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 BIN2Q9UBW5 565 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-235ENST00000616973 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 A0A1B0GTH6 734 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 PSDA5PKW4 1024 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-235ENST00000616973 TNNT1P13805 278 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 CDC25AP30304 524 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 KCNB1Q14721 858 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 NR1I3Q14994 352 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 CERKLQ49MI3 558 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-235ENST00000616973 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 NYAP1Q6ZVC0 841 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 DCAF4Q8WV16 495 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 COA7Q96BR5 231 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 C16orf45Q96MC5 204 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-235ENST00000616973 KBTBD4Q9NVX7 518 aa17.76■□□□□ 0.43
NR1H3-235ENST00000616973 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-235ENST00000616973 ZBTB5O15062 677 aa17.75■□□□□ 0.43
NR1H3-235ENST00000616973 EN1Q05925 392 aaPredicted RBP17.75■□□□□ 0.43
NR1H3-235ENST00000616973 TCP10Q12799 353 aa17.75■□□□□ 0.43
NR1H3-235ENST00000616973 RWDD2AQ9UIY3 292 aa17.75■□□□□ 0.43
NR1H3-235ENST00000616973 PP2D1A8MPX8 630 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
NR1H3-235ENST00000616973 CACNB3P54284 484 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 CCDC96Q2M329 555 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 TTBK2Q6IQ55 1244 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 APTXQ7Z2E3 356 aaKnown RBP17.74■□□□□ 0.43
NR1H3-235ENST00000616973 CABP7Q86V35 215 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 MTMR9Q96QG7 549 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 CTAGE1Q96RT6 745 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 TMEM260Q9NX78 707 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 RGS17Q9UGC6 210 aaPredicted RBP17.74■□□□□ 0.43
NR1H3-235ENST00000616973 PAXBP1Q9Y5B6 917 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 KIF13BQ9NQT8 1826 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 USP27XA6NNY8 438 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 PPP1R11O60927 126 aaPredicted RBP17.74■□□□□ 0.43
NR1H3-235ENST00000616973 EEF2P13639 858 aaKnown RBP17.74■□□□□ 0.43
NR1H3-235ENST00000616973 E4F1Q66K89 784 aaPredicted RBP17.74■□□□□ 0.43
NR1H3-235ENST00000616973 SPECC1LQ69YQ0 1117 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 KLHL10Q6JEL2 608 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 TMEM179Q6ZVK1 233 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms