RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 VPS13AQ96RL7 3174 aa8.43□□□□□ -1.06
MUC1-221ENST00000610359 BAZ2AQ9UIF9 1905 aaKnown RBP8.42□□□□□ -1.06
MUC1-221ENST00000610359 LCHNA4D1U4 455 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 C19orf67A6NJJ6 358 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 GFRA3O60609 400 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 PTGS1P23219 599 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 PLCD1P51178 756 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 PTPN5P54829 565 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 ZP2Q05996 745 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 ITGA7Q13683 1181 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 ACVR2BQ13705 512 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 CCDC144BQ3MJ40 725 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 HERC6Q8IVU3 1022 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 SPICE1Q8N0Z3 855 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 MSL3Q8N5Y2 521 aaKnown RBP8.42□□□□□ -1.06
MUC1-221ENST00000610359 REPS2Q8NFH8 660 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 PHOSPHO2Q8TCD6 241 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 FGD4Q96M96 766 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 MFSD14AQ96MC6 490 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 SLC9A7Q96T83 725 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 FAM86C1Q9NVL1 165 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 ZNF536O15090 1300 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 SCN10AQ9Y5Y9 1956 aa8.42□□□□□ -1.06
MUC1-221ENST00000610359 LCTP09848 1927 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 DNAJC25-GNG10A0A024R161 153 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.41□□□□□ -1.06
MUC1-221ENST00000610359 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
MUC1-221ENST00000610359 PFKMP08237 780 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 STAT3P40763 770 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 PSMC6P62333 389 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 TMCO2Q7Z6W1 182 aaPredicted RBP8.41□□□□□ -1.06
MUC1-221ENST00000610359 CLEC10AQ8IUN9 316 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 NEK9Q8TD19 979 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 KATNBL1Q9H079 304 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 FBXO28Q9NVF7 368 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.41□□□□□ -1.06
MUC1-221ENST00000610359 ZNF214Q9UL59 606 aaPredicted RBP8.41□□□□□ -1.06
MUC1-221ENST00000610359 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 MICAL3Q7RTP6 2002 aa8.41□□□□□ -1.06
MUC1-221ENST00000610359 COL4A6Q14031 1691 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 DNAH14Q0VDD8 3507 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 PTPRCP08575 1304 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 H3BQ06 376 aaPredicted RBP8.4□□□□□ -1.06
MUC1-221ENST00000610359 RBAK-RBAKDNI3L0D1 243 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 VWA5AO00534 786 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 UBTFL1P0CB47 393 aaPredicted RBP8.4□□□□□ -1.06
MUC1-221ENST00000610359 CYP2C9P11712 490 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 IRS1P35568 1242 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 GABPAQ06546 454 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 SPC25Q9HBM1 224 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 PIH1D3Q9NQM4 214 aaKnown RBP8.4□□□□□ -1.06
MUC1-221ENST00000610359 RIPK3Q9Y572 518 aa8.4□□□□□ -1.06
MUC1-221ENST00000610359 ZNF292O60281 2723 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 BAHCC1Q9P281 2608 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 NCOR2Q9Y618 2525 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 KIF28PB7ZC32 967 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 MPHOSPH10O00566 681 aaKnown RBP8.39□□□□□ -1.07
MUC1-221ENST00000610359 USP5P45974 858 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 GORABQ5T7V8 394 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 ZNF467Q7Z7K2 595 aaPredicted RBP8.39□□□□□ -1.07
MUC1-221ENST00000610359 TTC6Q86TZ1 520 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 MIGA1Q8NAN2 632 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 ALDH8A1Q9H2A2 487 aaPredicted RBP8.39□□□□□ -1.07
MUC1-221ENST00000610359 ABHD16BQ9H3Z7 469 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 VCPKMTQ9H867 229 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 TRMT13Q9NUP7 481 aaKnown RBP8.39□□□□□ -1.07
MUC1-221ENST00000610359 MUTYHQ9UIF7 546 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 MTUS1Q9ULD2 1270 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
MUC1-221ENST00000610359 TMX2Q9Y320 296 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 MYH4Q9Y623 1939 aa8.39□□□□□ -1.07
MUC1-221ENST00000610359 DMXL1Q9Y485 3027 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 WDR46O15213 610 aaKnown RBP8.38□□□□□ -1.07
MUC1-221ENST00000610359 CABYRO75952 493 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 KRT37O76014 449 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 UQCRFS1P1P0C7P4 283 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 ACTN1P12814 892 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 CYP7A1P22680 504 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 ERVK-21P61565 698 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 PUS10Q3MIT2 529 aaKnown RBP8.38□□□□□ -1.07
MUC1-221ENST00000610359 HERC4Q5GLZ8 1057 aaPredicted RBP8.38□□□□□ -1.07
MUC1-221ENST00000610359 TMEM63BQ5T3F8 832 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 ARMCX2Q7L311 632 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 BMP8AQ7Z5Y6 402 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 ADHFE1Q8IWW8 467 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 DDX11Q96FC9 970 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 PRKAG3Q9UGI9 489 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 PPP1R9AQ9ULJ8 1098 aa8.38□□□□□ -1.07
MUC1-221ENST00000610359 GREB1LQ9C091 1923 aaPredicted RBP8.38□□□□□ -1.07
MUC1-221ENST00000610359 EP300Q09472 2414 aaPredicted RBP8.38□□□□□ -1.07
MUC1-221ENST00000610359 LINC01553A4QN01 128 aa8.37□□□□□ -1.07
MUC1-221ENST00000610359 RGS20O76081 388 aa8.37□□□□□ -1.07
MUC1-221ENST00000610359 ZAP70P43403 619 aa8.37□□□□□ -1.07
MUC1-221ENST00000610359 TNFAIP2Q03169 654 aa8.37□□□□□ -1.07
MUC1-221ENST00000610359 FSCN1Q16658 493 aaKnown RBP8.37□□□□□ -1.07
MUC1-221ENST00000610359 TMEM179Q6ZVK1 233 aa8.37□□□□□ -1.07
MUC1-221ENST00000610359 ASCL5Q7RTU5 278 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms