RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 FIBCD1Q8N539 461 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 YIPF2Q9BWQ6 316 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 CEP41Q9BYV8 373 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 PRDM10Q9NQV6 1147 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 TCEAL9Q9UHQ7 104 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 EID1Q9Y6B2 187 aa6.93□□□□□ -1.3
LINC00397-202ENST00000606785 GAS2O43903 313 aaKnown RBP6.92□□□□□ -1.3
LINC00397-202ENST00000606785 ALDH1L1O75891 902 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 CPP00450 1065 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 SNRPB2P08579 225 aaKnown RBP6.92□□□□□ -1.3
LINC00397-202ENST00000606785 H2AFB1P0C5Y9 115 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 H2AFB2P0C5Z0 115 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 IGFALSP35858 605 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 KCNJ6P48051 423 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 NEK4P51957 841 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 STRN3Q13033 797 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 SNW1Q13573 536 aaKnown RBP6.92□□□□□ -1.3
LINC00397-202ENST00000606785 ZNF460Q14592 562 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 PCBP1Q15365 356 aaKnown RBP eCLIP6.92□□□□□ -1.3
LINC00397-202ENST00000606785 DHCR24Q15392 516 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 NTRK3Q16288 839 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 Q6ZS46 218 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 TMEM145Q8NBT3 493 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 EZH1Q92800 747 aaPredicted RBP6.92□□□□□ -1.3
LINC00397-202ENST00000606785 C1orf159Q96HA4 380 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 SCLYQ96I15 445 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 AKTIPQ9H8T0 292 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
LINC00397-202ENST00000606785 ALX3O95076 343 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 NFICP08651 508 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 CYP7A1P22680 504 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 FLT3P36888 993 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 AMPD2Q01433 879 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 SLC35F1Q5T1Q4 408 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 PKN3Q6P5Z2 889 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 NECAB2Q7Z6G3 386 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 MAGEB10Q96LZ2 347 aaPredicted RBP6.91□□□□□ -1.3
LINC00397-202ENST00000606785 POLR3GLQ9BT43 218 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 DSCC1Q9BVC3 393 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 MTFR1LQ9H019 292 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 GFOD1Q9NXC2 390 aa6.91□□□□□ -1.3
LINC00397-202ENST00000606785 SF3B6Q9Y3B4 125 aaKnown RBP6.91□□□□□ -1.3
LINC00397-202ENST00000606785 TCRBV16S1A1N1A0A5B0 115 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 HYAL3O43820 417 aaPredicted RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 KPNA6O60684 536 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 JMJD7P0C870 316 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 ITIH2P19823 946 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 ECI1P42126 302 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 EPHB1P54762 984 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 TTF1Q15361 905 aaPredicted RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 SEPT7Q16181 437 aaKnown RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 RNF219Q5W0B1 726 aaPredicted RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 RAVER1Q8IY67 606 aaKnown RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 WDR66Q8TBY9 1149 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 FBLIM1Q8WUP2 373 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 FAM46AQ96IP4 442 aaKnown RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 COX4I2Q96KJ9 171 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 ZDHHC15Q96MV8 337 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 LGR6Q9HBX8 967 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 SLC52A1Q9NWF4 448 aa6.9□□□□□ -1.3
LINC00397-202ENST00000606785 GPR55Q9Y2T6 319 aaPredicted RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 ARID4BQ4LE39 1312 aaPredicted RBP6.9□□□□□ -1.3
LINC00397-202ENST00000606785 PHLDB1Q86UU1 1377 aa6.9□□□□□ -1.31
LINC00397-202ENST00000606785 B4E1Z4 1266 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 DYNC1LI2O43237 492 aaPredicted RBP6.89□□□□□ -1.31
LINC00397-202ENST00000606785 SIGLEC6O43699 453 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 BRINP1O60477 761 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 LRRN2O75325 713 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 VAMP4O75379 141 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 KATNA1O75449 491 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 EOMESO95936 686 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 GLB1P16278 677 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 CYP4F3Q08477 520 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 GRIK4Q16099 956 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 CFAP100Q494V2 611 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 STYK1Q6J9G0 422 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 SEZ6L2Q6UXD5 910 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
LINC00397-202ENST00000606785 TMC3Q7Z5M5 1100 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 DCAF4Q8WV16 495 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 LENG1Q96BZ8 264 aaPredicted RBP6.89□□□□□ -1.31
LINC00397-202ENST00000606785 ASPSCR1Q9BZE9 553 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 GEMIN8Q9NWZ8 242 aaKnown RBP6.89□□□□□ -1.31
LINC00397-202ENST00000606785 SLC5A4Q9NY91 659 aa6.89□□□□□ -1.31
LINC00397-202ENST00000606785 TPX2Q9ULW0 747 aaKnown RBP6.89□□□□□ -1.31
LINC00397-202ENST00000606785 CCDC194A0A1B0GVG4 234 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 AQP7O14520 342 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 GPR39O43194 453 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 RASGRP1O95267 797 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 CRTAMO95727 393 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 APPP05067 770 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 STAT4Q14765 748 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 NFE2Q16621 373 aaPredicted RBP6.88□□□□□ -1.31
LINC00397-202ENST00000606785 PRSS53Q2L4Q9 553 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 UVSSAQ2YD98 709 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 SGO2Q562F6 1265 aa6.88□□□□□ -1.31
LINC00397-202ENST00000606785 TOP6BLQ8N6T0 577 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms