RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 EPHB4P54760 987 aa24.03■■□□□ 1.44
PPFIA3-204ENST00000602492 FAAP100Q0VG06 881 aa24.03■■□□□ 1.44
PPFIA3-204ENST00000602492 CCSAPQ6IQ19 270 aaPredicted RBP24.03■■□□□ 1.44
PPFIA3-204ENST00000602492 GLT1D1Q96MS3 346 aa24.03■■□□□ 1.44
PPFIA3-204ENST00000602492 MYADML2A6NDP7 307 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 TMEM232C9JQI7 657 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 CENPBP07199 599 aaPredicted RBP24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 C6orf222P0C671 652 aaPredicted RBP24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 CST5P28325 142 aaPredicted RBP24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 TFAP4Q01664 338 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 PPARAQ07869 468 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 CCDC144BQ3MJ40 725 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 ARMCX2Q7L311 632 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 PCSK9Q8NBP7 692 aaKnown RBP24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 PI4K2BQ8TCG2 481 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 FGD4Q96M96 766 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 HOMER2Q9NSB8 354 aa24.02■■□□□ 1.44
PPFIA3-204ENST00000602492 STAT2P52630 851 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 PPP4R3BQ5MIZ7 849 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 ZMYM1Q5SVZ6 1142 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 FAM160B2Q86V87 743 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 CHURC1Q8WUH1 139 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 TTYH1Q9H313 450 aaPredicted RBP24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 ACAD9Q9H845 621 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 MCM3APO60318 1980 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 ELP1O95163 1332 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 MROH7Q68CQ1 1323 aa24.01■■□□□ 1.43
PPFIA3-204ENST00000602492 GJA9P57773 515 aa24■■□□□ 1.43
PPFIA3-204ENST00000602492 IKQ13123 557 aaPredicted RBP24■■□□□ 1.43
PPFIA3-204ENST00000602492 OTUD7AQ8TE49 926 aaPredicted RBP24■■□□□ 1.43
PPFIA3-204ENST00000602492 VTI1AQ96AJ9 217 aa24■■□□□ 1.43
PPFIA3-204ENST00000602492 GMCL1Q96IK5 515 aa24■■□□□ 1.43
PPFIA3-204ENST00000602492 UPF3AQ9H1J1 476 aaKnown RBP24■■□□□ 1.43
PPFIA3-204ENST00000602492 EYSQ5T1H1 3165 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 CDH23Q9H251 3354 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 TMEM265A0A087WTH1 108 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 ADCY6O43306 1168 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 TIMP1P01033 207 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 ASGR1P07306 291 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 SLC1A4P43007 532 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 CCDC144CPQ8IYA2 1237 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 MAFAQ8NHW3 353 aaPredicted RBP23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 STAG1Q8WVM7 1258 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 MYLIPQ8WY64 445 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 COL25A1Q9BXS0 654 aaPredicted RBP23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 TBX21Q9UL17 535 aa23.99■■□□□ 1.43
PPFIA3-204ENST00000602492 IRX5P78411 483 aaPredicted RBP23.98■■□□□ 1.43
PPFIA3-204ENST00000602492 CNTN2Q02246 1040 aa23.98■■□□□ 1.43
PPFIA3-204ENST00000602492 GNASQ5JWF2 1037 aa23.98■■□□□ 1.43
PPFIA3-204ENST00000602492 FAM133AQ8N9E0 248 aa23.98■■□□□ 1.43
PPFIA3-204ENST00000602492 RNF146Q9NTX7 359 aa23.98■■□□□ 1.43
PPFIA3-204ENST00000602492 PCDHB15Q9Y5E8 787 aa23.98■■□□□ 1.43
PPFIA3-204ENST00000602492 PRUNE2Q8WUY3 3088 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 A0A0U1RQG5 324 aaPredicted RBP23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 MX1P20591 662 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 MCCP23508 829 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 CDK7P50613 346 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 TKFCQ3LXA3 575 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 CHMP4CQ96CF2 233 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 AGBL1Q96MI9 1066 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 KATNBL1Q9H079 304 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 A1CFQ9NQ94 594 aaKnown RBP23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 STX8Q9UNK0 236 aa23.97■■□□□ 1.43
PPFIA3-204ENST00000602492 ZNF536O15090 1300 aa23.96■■□□□ 1.43
PPFIA3-204ENST00000602492 TSPY2A6NKD2 308 aa23.96■■□□□ 1.43
PPFIA3-204ENST00000602492 ARVCFO00192 962 aa23.96■■□□□ 1.43
PPFIA3-204ENST00000602492 PLA2G6O60733 806 aa23.96■■□□□ 1.43
PPFIA3-204ENST00000602492 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.96■■□□□ 1.43
PPFIA3-204ENST00000602492 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 ASB14A6NK59 587 aa23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 FOSL2P15408 326 aa23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 PPIGQ13427 754 aaKnown RBP eCLIP23.95■■□□□ 1.422e-6■■■□□ 15.9
PPFIA3-204ENST00000602492 MFSD5Q6N075 450 aa23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 CCDC174Q6PII3 467 aa23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 NOL8Q76FK4 1167 aaKnown RBP23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 TRERF1Q96PN7 1200 aa23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 TTC28Q96AY4 2481 aa23.95■■□□□ 1.42
PPFIA3-204ENST00000602492 VCANP13611 3396 aa23.94■■□□□ 1.42
PPFIA3-204ENST00000602492 ALAS1P13196 640 aa23.94■■□□□ 1.42
PPFIA3-204ENST00000602492 TNFAIP2Q03169 654 aa23.94■■□□□ 1.42
PPFIA3-204ENST00000602492 CTDSPL2Q05D32 466 aa23.94■■□□□ 1.42
PPFIA3-204ENST00000602492 RCSD1Q6JBY9 416 aa23.94■■□□□ 1.42
PPFIA3-204ENST00000602492 CCDC129Q6ZRS4 1044 aa23.94■■□□□ 1.42
PPFIA3-204ENST00000602492 KCTD1Q719H9 257 aa23.94■■□□□ 1.42
PPFIA3-204ENST00000602492 SOWAHBA6NEL2 793 aa23.93■■□□□ 1.42
PPFIA3-204ENST00000602492 CTAGE5O15320 804 aa23.93■■□□□ 1.42
PPFIA3-204ENST00000602492 FOXP2O15409 715 aa23.93■■□□□ 1.42
PPFIA3-204ENST00000602492 TLR3O15455 904 aaKnown RBP23.93■■□□□ 1.42
PPFIA3-204ENST00000602492 DNAJB2P25686 324 aa23.93■■□□□ 1.42
PPFIA3-204ENST00000602492 NKX3-2P78367 333 aa23.93■■□□□ 1.42
PPFIA3-204ENST00000602492 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.93■■□□□ 1.42
PPFIA3-204ENST00000602492 ZBTB47Q9UFB7 747 aaPredicted RBP23.93■■□□□ 1.42
PPFIA3-204ENST00000602492 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.92■■□□□ 1.42
PPFIA3-204ENST00000602492 RANBP6O60518 1105 aaKnown RBP23.92■■□□□ 1.42
PPFIA3-204ENST00000602492 NMT2O60551 498 aa23.92■■□□□ 1.42
PPFIA3-204ENST00000602492 BEX3Q00994 111 aa23.92■■□□□ 1.42
PPFIA3-204ENST00000602492 FAM126BQ8IXS8 530 aa23.92■■□□□ 1.42
PPFIA3-204ENST00000602492 TMEM199Q8N511 208 aa23.92■■□□□ 1.42
PPFIA3-204ENST00000602492 INCENPQ9NQS7 918 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms