RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 FCER1AP12319 257 aa23.44■■□□□ 1.34
SSBP4-210ENST00000601444 DHX32Q7L7V1 743 aaKnown RBP23.44■■□□□ 1.34
SSBP4-210ENST00000601444 MMP19Q99542 508 aa23.44■■□□□ 1.34
SSBP4-210ENST00000601444 MTA3Q9BTC8 594 aa23.44■■□□□ 1.34
SSBP4-210ENST00000601444 FLRT1Q9NZU1 646 aa23.44■■□□□ 1.34
SSBP4-210ENST00000601444 PALM3A6NDB9 673 aaPredicted RBP23.43■■□□□ 1.34
SSBP4-210ENST00000601444 EPB41L2O43491 1005 aaKnown RBP23.43■■□□□ 1.34
SSBP4-210ENST00000601444 INHAP05111 366 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 PGK2P07205 417 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 XRCC5P13010 732 aaKnown RBP23.43■■□□□ 1.34
SSBP4-210ENST00000601444 SOX10P56693 466 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 GRM4Q14833 912 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 NFXL1Q6ZNB6 911 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 CATIPQ7Z7H3 387 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 DPP9Q86TI2 863 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 ADGRF4Q8IZF3 695 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 ZNF654Q8IZM8 581 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 APBA2Q99767 749 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 VAT1LQ9HCJ6 419 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 GTF3C3Q9Y5Q9 886 aa23.43■■□□□ 1.34
SSBP4-210ENST00000601444 KLRF2D3W0D1 207 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 ICAM1P05362 532 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 ALAS1P13196 640 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 COPB2P35606 906 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 SLC35G1Q2M3R5 365 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 RAB11FIP4Q86YS3 637 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 ABRAQ8N0Z2 381 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 NUP133Q8WUM0 1156 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 CCPG1Q9ULG6 757 aa23.42■■□□□ 1.34
SSBP4-210ENST00000601444 CCDC69A6NI79 296 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 HOXC6P09630 235 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 RXRAP19793 462 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 LIFRP42702 1097 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 KCTD2Q14681 263 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 MUM1L1Q5H9M0 696 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 TRERF1Q96PN7 1200 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 JMJD4Q9H9V9 463 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 RNF146Q9NTX7 359 aa23.41■■□□□ 1.34
SSBP4-210ENST00000601444 POTEFA5A3E0 1075 aa23.4■■□□□ 1.34
SSBP4-210ENST00000601444 HMGCRP04035 888 aa23.4■■□□□ 1.34
SSBP4-210ENST00000601444 TMTC2Q8N394 836 aa23.4■■□□□ 1.34
SSBP4-210ENST00000601444 CHST13Q8NET6 341 aa23.4■■□□□ 1.34
SSBP4-210ENST00000601444 UNC93B1Q9H1C4 597 aa23.4■■□□□ 1.34
SSBP4-210ENST00000601444 BRCA2P51587 3418 aa23.4■■□□□ 1.34
SSBP4-210ENST00000601444 WDR19Q8NEZ3 1342 aa23.39■■□□□ 1.34
SSBP4-210ENST00000601444 DHX16O60231 1041 aaKnown RBP23.39■■□□□ 1.33
SSBP4-210ENST00000601444 HMGB1P09429 215 aaKnown RBP23.39■■□□□ 1.33
SSBP4-210ENST00000601444 CCL5P13501 91 aa23.39■■□□□ 1.33
SSBP4-210ENST00000601444 UBXN2AP68543 259 aa23.39■■□□□ 1.33
SSBP4-210ENST00000601444 CCDC144CPQ8IYA2 1237 aa23.39■■□□□ 1.33
SSBP4-210ENST00000601444 BRPF3Q9ULD4 1205 aa23.39■■□□□ 1.33
SSBP4-210ENST00000601444 DDAH1O94760 285 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 CASTP20810 708 aaKnown RBP23.38■■□□□ 1.33
SSBP4-210ENST00000601444 CDC37Q16543 378 aaPredicted RBP23.38■■□□□ 1.33
SSBP4-210ENST00000601444 ZNF792Q3KQV3 632 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 C8orf34Q49A92 452 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 BLOC1S2Q6QNY1 142 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 SGMS1Q86VZ5 419 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 ANKRD35Q8N283 1001 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 ACAD9Q9H845 621 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 FBXO40Q9UH90 709 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 SLC12A7Q9Y666 1083 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 ZNF236Q9UL36 1845 aa23.38■■□□□ 1.33
SSBP4-210ENST00000601444 CYTH3O43739 400 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 IGHA2P01877 340 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 RPS6KB1P23443 525 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 CYP2C19P33261 490 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 CACNB2Q08289 660 aaPredicted RBP23.37■■□□□ 1.33
SSBP4-210ENST00000601444 QRICH1Q2TAL8 776 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 TKFCQ3LXA3 575 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 USH1GQ495M9 461 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 Q6ZUG5 572 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.37■■□□□ 1.33
SSBP4-210ENST00000601444 TRMT44Q8IYL2 757 aaKnown RBP23.37■■□□□ 1.33
SSBP4-210ENST00000601444 DDX11Q96FC9 970 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 MAML3Q96JK9 1138 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 RNF208Q9H0X6 261 aa23.37■■□□□ 1.33
SSBP4-210ENST00000601444 DNAJC25-GNG10A0A024R161 153 aa23.36■■□□□ 1.33
SSBP4-210ENST00000601444 PRKAR2AP13861 404 aaKnown RBP23.36■■□□□ 1.33
SSBP4-210ENST00000601444 PSMA5P28066 241 aa23.36■■□□□ 1.33
SSBP4-210ENST00000601444 CMTR1Q8N1G2 835 aaKnown RBP23.36■■□□□ 1.33
SSBP4-210ENST00000601444 MAP3K14Q99558 947 aa23.36■■□□□ 1.33
SSBP4-210ENST00000601444 A1CFQ9NQ94 594 aaKnown RBP23.36■■□□□ 1.33
SSBP4-210ENST00000601444 NFIBO00712 420 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 PLEKHA8P1O95397 391 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 MAP3K21Q5TCX8 1036 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 APOA5Q6Q788 366 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 CTCFLQ8NI51 663 aaPredicted RBP23.35■■□□□ 1.33
SSBP4-210ENST00000601444 CLEC4DQ8WXI8 215 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 MTMR8Q96EF0 704 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 TMEM106CQ9BVX2 250 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 RIOX1Q9H6W3 641 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 ZSWIM6Q9HCJ5 1215 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 SLC5A4Q9NY91 659 aa23.35■■□□□ 1.33
SSBP4-210ENST00000601444 SMCHD1A6NHR9 2005 aa23.34■■□□□ 1.33
SSBP4-210ENST00000601444 PPP1R11O60927 126 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-210ENST00000601444 EN2P19622 333 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-210ENST00000601444 CCND3P30281 292 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-210ENST00000601444 CNTN2Q02246 1040 aa23.34■■□□□ 1.33
SSBP4-210ENST00000601444 OLFML2BQ68BL8 750 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms