RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 SYNE3Q6ZMZ3 975 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNRPA-208ENST00000600456 NBPF11Q86T75 865 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 TRMT44Q8IYL2 757 aaKnown RBP16.1■□□□□ 0.17
SNRPA-208ENST00000600456 CHST13Q8NET6 341 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 CTCFLQ8NI51 663 aaPredicted RBP16.1■□□□□ 0.17
SNRPA-208ENST00000600456 ARMC5Q96C12 935 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 HOXC6P09630 235 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 CASTP20810 708 aaKnown RBP16.09■□□□□ 0.17
SNRPA-208ENST00000600456 GRK4P32298 578 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 RCAN1P53805 252 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 KCTD2Q14681 263 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 CCDC174Q6PII3 467 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 IL17RAQ96F46 866 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 APBA2Q99767 749 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 LZTS2Q9BRK4 669 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 SLC5A4Q9NY91 659 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 CYP46A1Q9Y6A2 500 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 ZNF236Q9UL36 1845 aa16.09■□□□□ 0.17
SNRPA-208ENST00000600456 COL11A1P12107 1806 aaPredicted RBP16.08■□□□□ 0.17
SNRPA-208ENST00000600456 ADCY3O60266 1144 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 SEC24BO95487 1268 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 SMARCA1P28370 1054 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 ADORA2AP29274 412 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 GNAQP50148 359 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 ADGRF4Q8IZF3 695 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 AGBL1Q96MI9 1066 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 TCEANC2Q96MN5 208 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 MMP19Q99542 508 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 CCPG1Q9ULG6 757 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 RIPK3Q9Y572 518 aa16.08■□□□□ 0.16
SNRPA-208ENST00000600456 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
SNRPA-208ENST00000600456 CPA1P15085 419 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 CYP2B6P20813 491 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 SNAP25P60880 206 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
SNRPA-208ENST00000600456 APOA5Q6Q788 366 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 Q6ZUG5 572 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 AGXT2Q9BYV1 514 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 CPVLQ9H3G5 476 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
SNRPA-208ENST00000600456 ZBTB43O43298 467 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 HMGCRP04035 888 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 ALAS1P13196 640 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 TRAF1Q13077 416 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 DPP9Q86TI2 863 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 FANCBQ8NB91 859 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 SH3TC2Q8TF17 1288 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 ZNF333Q96JL9 665 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 MYL10Q9BUA6 226 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 BRPF3Q9ULD4 1205 aa16.06■□□□□ 0.16
SNRPA-208ENST00000600456 DIS3Q9Y2L1 958 aaKnown RBP16.06■□□□□ 0.16
SNRPA-208ENST00000600456 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 PFASO15067 1338 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 KLF18A0A0U1RQI7 1052 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 ELNP15502 786 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 UBXN2AP68543 259 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 MICU3Q86XE3 530 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 ANKRD35Q8N283 1001 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 BRF1Q92994 677 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 SPZ1Q9BXG8 430 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 MAF1Q9H063 256 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 HOMER2Q9NSB8 354 aa16.05■□□□□ 0.16
SNRPA-208ENST00000600456 RBM28Q9NW13 759 aaKnown RBP16.05■□□□□ 0.16
SNRPA-208ENST00000600456 BIN2Q9UBW5 565 aaPredicted RBP16.05■□□□□ 0.16
SNRPA-208ENST00000600456 HTTP42858 3142 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 ABCB11O95342 1321 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 ZBTB5O15062 677 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 COBLO75128 1261 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 EVCP57679 992 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 FBXO11Q86XK2 927 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 TRIB2Q92519 343 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 AMNQ9BXJ7 453 aa16.04■□□□□ 0.16
SNRPA-208ENST00000600456 UPF3BQ9BZI7 483 aaKnown RBP16.04■□□□□ 0.16
SNRPA-208ENST00000600456 DNAJC25-GNG10A0A024R161 153 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 GOLGA8BA8MQT2 603 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 CYTH3O43739 400 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 INHAP05111 366 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 RXRAP19793 462 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 RTN1Q16799 776 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 ZNF792Q3KQV3 632 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms