RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 PRPF3O43395 683 aaKnown RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 PENKP01210 267 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 CD53P19397 219 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 CLNS1AP54105 237 aaKnown RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 NAA30Q147X3 362 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 MILR1Q7Z6M3 343 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 DHX40Q8IX18 779 aaKnown RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 C16orf71Q8IYS4 520 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 CLASRPQ8N2M8 674 aaKnown RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 PI4KAP1Q8N8J0 262 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 CCDC148Q8NFR7 591 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 KIFC2Q96AC6 838 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 TRERF1Q96PN7 1200 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 UPF3BQ9BZI7 483 aaKnown RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 FAM204AQ9H8W3 233 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 EBF2Q9HAK2 575 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 RGL1Q9NZL6 768 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 RCOR1Q9UKL0 485 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 TNS2Q63HR2 1409 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 PAPPAQ13219 1627 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 UBR2Q8IWV8 1755 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 DOT1LQ8TEK3 1739 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 PCDH11XQ9BZA7 1347 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 PCDH11YQ9BZA8 1340 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 TRIM64CA6NLI5 447 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 KIF5CO60282 957 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 MGRN1O60291 552 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 GLULP15104 373 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 PSMD7P51665 324 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 BPIFB3P59826 476 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 KRT32Q14532 448 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 E2F4Q16254 413 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 EPHA10Q5JZY3 1008 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 SLC4A10Q6U841 1118 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 SYNE3Q6ZMZ3 975 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 ZNF572Q7Z3I7 529 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 CD302Q8IX05 232 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 IQCF2Q8IXL9 164 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 CAPS2Q9BXY5 557 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 LRRC27Q9C0I9 530 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 USP44Q9H0E7 712 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 TFIP11Q9UBB9 837 aaKnown RBP4.89□□□□□ -1.63
LRIT3-202ENST00000594814 COL4A3BPQ9Y5P4 624 aa4.89□□□□□ -1.63
LRIT3-202ENST00000594814 PNMA6EA0A0J9YXQ4 647 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CTAGE15A4D2H0 777 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 USP27XA6NNY8 438 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 FIBPO43427 364 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 RNF40O75150 1001 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CCDC175P0C221 793 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CTAGE8P0CG41 777 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CNGA1P29973 690 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 GBP2P32456 591 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-202ENST00000594814 XRCC4Q13426 336 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 TRIM14Q14142 442 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 DDB1Q16531 1140 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 HLFQ16534 295 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CCDC40Q4G0X9 1142 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SH2D4BQ5SQS7 431 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CEP85Q6P2H3 762 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CACNA2D4Q7Z3S7 1137 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CTAGE6Q86UF2 777 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 NCAPG2Q86XI2 1143 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CTAGE4Q8IX94 777 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 OTUD7AQ8TE49 926 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-202ENST00000594814 COG1Q8WTW3 980 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 JAKMIP2Q96AA8 810 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 NACC2Q96BF6 587 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 IER2Q9BTL4 223 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 DACT1Q9NYF0 836 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 PPP2R3BQ9Y5P8 575 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SQORQ9Y6N5 450 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 ATRNO75882 1429 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SPDYE2BA6NHP3 402 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SPDYE5A6NIY4 337 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 WFS1O76024 890 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 TPPPO94811 219 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SPDYE6P0CI01 402 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 PDE6BP35913 854 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CLCN2P51788 898 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 NLRP12P59046 1061 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 DEUP1Q05D60 604 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 LBRQ14739 615 aaKnown RBP4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SGSM1Q2NKQ1 1148 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SPDYE2Q495Y8 402 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 BEND3Q5T5X7 828 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CWF19L1Q69YN2 538 aaKnown RBP4.88□□□□□ -1.63
LRIT3-202ENST00000594814 PPP4R3AQ6IN85 833 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 INTS5Q6P9B9 1019 aaKnown RBP4.88□□□□□ -1.63
LRIT3-202ENST00000594814 IGF2-ASQ6U949 168 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 COPS6Q7L5N1 327 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SLF2Q8IX21 1173 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SEPT12Q8IYM1 358 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 ARHGAP18Q8N392 663 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 SMARCC2Q8TAQ2 1214 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 JPH2Q9BR39 696 aaPredicted RBP4.88□□□□□ -1.63
LRIT3-202ENST00000594814 BHMT2Q9H2M3 363 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 EPS15L1Q9UBC2 864 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 PPP2R2CQ9Y2T4 447 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CYP46A1Q9Y6A2 500 aa4.88□□□□□ -1.63
LRIT3-202ENST00000594814 CENPFP49454 3210 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms