RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 FAM184BQ9ULE4 1060 aa18.31■□□□□ 0.52
FOXA3-202ENST00000594297 LRRC37A2A6NM11 1700 aa18.31■□□□□ 0.52
FOXA3-202ENST00000594297 GOLIM4O00461 696 aa18.3■□□□□ 0.52
FOXA3-202ENST00000594297 PRKAB2O43741 272 aa18.3■□□□□ 0.52
FOXA3-202ENST00000594297 SDSP20132 328 aa18.3■□□□□ 0.52
FOXA3-202ENST00000594297 CST5P28325 142 aaPredicted RBP18.3■□□□□ 0.52
FOXA3-202ENST00000594297 COPB2P35606 906 aa18.3■□□□□ 0.52
FOXA3-202ENST00000594297 CDK7P50613 346 aa18.3■□□□□ 0.52
FOXA3-202ENST00000594297 MRPS5P82675 430 aaKnown RBP18.3■□□□□ 0.52
FOXA3-202ENST00000594297 ZNF365Q70YC5 407 aa18.3■□□□□ 0.52
FOXA3-202ENST00000594297 GLT1D1Q96MS3 346 aa18.3■□□□□ 0.52
FOXA3-202ENST00000594297 FSD1Q9BTV5 496 aa18.3■□□□□ 0.52
FOXA3-202ENST00000594297 MYH7P12883 1935 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 ELP1O95163 1332 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 RAD21O60216 631 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 DUSP11O75319 330 aaKnown RBP18.29■□□□□ 0.52
FOXA3-202ENST00000594297 CDC45O75419 566 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 ASGR1P07306 291 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 C6orf222P0C671 652 aaPredicted RBP18.29■□□□□ 0.52
FOXA3-202ENST00000594297 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
FOXA3-202ENST00000594297 IGFBP4P22692 258 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 CDK8P49336 464 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 FAM126BQ8IXS8 530 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 TMEM199Q8N511 208 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
FOXA3-202ENST00000594297 NKX2-4Q9H2Z4 354 aa18.29■□□□□ 0.52
FOXA3-202ENST00000594297 XIRP2A4UGR9 3374 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 DNAJC25-GNG10A0A024R161 153 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 A0A0U1RQG5 324 aaPredicted RBP18.28■□□□□ 0.52
FOXA3-202ENST00000594297 MBD4O95243 580 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 RAB30Q15771 203 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 SLFNL1Q499Z3 407 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 SNRNP48Q6IEG0 339 aaKnown RBP18.28■□□□□ 0.52
FOXA3-202ENST00000594297 MAMDC4Q6UXC1 1216 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 C16orf86Q6ZW13 317 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 CCDC17Q96LX7 622 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 GOPCQ9HD26 462 aa18.28■□□□□ 0.52
FOXA3-202ENST00000594297 CXXC1Q9P0U4 656 aaPredicted RBP18.28■□□□□ 0.52
FOXA3-202ENST00000594297 YBX2Q9Y2T7 364 aaKnown RBP18.28■□□□□ 0.52
FOXA3-202ENST00000594297 ARVCFO00192 962 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 ZFYP08048 801 aaPredicted RBP18.27■□□□□ 0.52
FOXA3-202ENST00000594297 C12orf60Q5U649 245 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 KBTBD3Q8NAB2 608 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 PCSK9Q8NBP7 692 aaKnown RBP18.27■□□□□ 0.52
FOXA3-202ENST00000594297 IL27Q8NEV9 243 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 RUFY2Q8WXA3 655 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 FAM122AQ96E09 287 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 NECAB3Q96P71 396 aaPredicted RBP18.27■□□□□ 0.52
FOXA3-202ENST00000594297 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
FOXA3-202ENST00000594297 TEX13BQ9BXU2 312 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 UPF3AQ9H1J1 476 aaKnown RBP18.27■□□□□ 0.52
FOXA3-202ENST00000594297 DIAPH3Q9NSV4 1193 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 MSRAQ9UJ68 235 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 RIPK3Q9Y572 518 aa18.27■□□□□ 0.52
FOXA3-202ENST00000594297 CYP2C18P33260 490 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 ACVR2BQ13705 512 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 HERVK_113Q902F9 699 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 VTI1AQ96AJ9 217 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 DDX11Q96FC9 970 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 FGD4Q96M96 766 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 SLF1Q9BQI6 1058 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 KANSL2Q9H9L4 492 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 IL23AQ9NPF7 189 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 ATP8A2Q9NTI2 1148 aa18.26■□□□□ 0.51
FOXA3-202ENST00000594297 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.26■□□□□ 0.51
FOXA3-202ENST00000594297 TCF20Q9UGU0 1960 aaKnown RBP18.26■□□□□ 0.51
FOXA3-202ENST00000594297 UMODL1Q5DID0 1318 aa18.25■□□□□ 0.51
FOXA3-202ENST00000594297 TLR3O15455 904 aaKnown RBP18.25■□□□□ 0.51
FOXA3-202ENST00000594297 GJA9P57773 515 aa18.25■□□□□ 0.51
FOXA3-202ENST00000594297 CCDC144BQ3MJ40 725 aa18.25■□□□□ 0.51
FOXA3-202ENST00000594297 ZNF467Q7Z7K2 595 aaPredicted RBP18.25■□□□□ 0.51
FOXA3-202ENST00000594297 MYH4Q9Y623 1939 aa18.25■□□□□ 0.51
FOXA3-202ENST00000594297 USP17L12C9JPN9 530 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 USP17L21D6R901 530 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 CTAGE5O15320 804 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 CD4P01730 458 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 CHGBP05060 677 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 ADD2P35612 726 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 AMOTL1Q8IY63 956 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.24■□□□□ 0.51
FOXA3-202ENST00000594297 SLC28A3Q9HAS3 691 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 SPC25Q9HBM1 224 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 BDP1A6H8Y1 2624 aa18.24■□□□□ 0.51
FOXA3-202ENST00000594297 SLC4A3P48751 1232 aa18.23■□□□□ 0.51
FOXA3-202ENST00000594297 BEX3Q00994 111 aa18.23■□□□□ 0.51
FOXA3-202ENST00000594297 GNASQ5JWF2 1037 aa18.23■□□□□ 0.51
FOXA3-202ENST00000594297 ARMCX2Q7L311 632 aa18.23■□□□□ 0.51
FOXA3-202ENST00000594297 MICALL1Q8N3F8 863 aa18.23■□□□□ 0.51
FOXA3-202ENST00000594297 MTIF3Q9H2K0 278 aaKnown RBP18.23■□□□□ 0.51
FOXA3-202ENST00000594297 ABHD16BQ9H3Z7 469 aa18.23■□□□□ 0.51
FOXA3-202ENST00000594297 MFAP1P55081 439 aaKnown RBP18.22■□□□□ 0.51
FOXA3-202ENST00000594297 TFF2Q03403 129 aa18.22■□□□□ 0.51
FOXA3-202ENST00000594297 PPP2R2DQ66LE6 453 aa18.22■□□□□ 0.51
FOXA3-202ENST00000594297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.22■□□□□ 0.51
FOXA3-202ENST00000594297 OTOP2Q7RTS6 562 aa18.22■□□□□ 0.51
FOXA3-202ENST00000594297 CPXCR1Q8N123 301 aa18.22■□□□□ 0.51
FOXA3-202ENST00000594297 KATNBL1Q9H079 304 aa18.22■□□□□ 0.51
FOXA3-202ENST00000594297 HIPK3Q9H422 1215 aa18.22■□□□□ 0.51
FOXA3-202ENST00000594297 MYO9BQ13459 2157 aa18.22■□□□□ 0.51
FOXA3-202ENST00000594297 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms