RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 COL9A3Q14050 684 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-213ENST00000590234 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
CXXC1-213ENST00000590234 RNF208Q9H0X6 261 aa17.09■□□□□ 0.33
CXXC1-213ENST00000590234 LY9Q9HBG7 655 aa17.09■□□□□ 0.33
CXXC1-213ENST00000590234 HOMER2Q9NSB8 354 aa17.09■□□□□ 0.33
CXXC1-213ENST00000590234 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
CXXC1-213ENST00000590234 POTEFA5A3E0 1075 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
CXXC1-213ENST00000590234 COBLO75128 1261 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 TRIM32Q13049 653 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 TKFCQ3LXA3 575 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 ADCK5Q3MIX3 580 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.08■□□□□ 0.32
CXXC1-213ENST00000590234 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 KCNB2Q92953 911 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 UNC93B1Q9H1C4 597 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 CPVLQ9H3G5 476 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 ACAD9Q9H845 621 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 RNF146Q9NTX7 359 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 FLRT1Q9NZU1 646 aa17.08■□□□□ 0.32
CXXC1-213ENST00000590234 PGK2P07205 417 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 ALAS1P13196 640 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
CXXC1-213ENST00000590234 TROAPQ12815 778 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 GRM4Q14833 912 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 MFSD14CQ5VZR4 134 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 ANKRD35Q8N283 1001 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 STAG2Q8N3U4 1231 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 DDX11Q96FC9 970 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
CXXC1-213ENST00000590234 MAD2L2Q9UI95 211 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
CXXC1-213ENST00000590234 ZNFX1Q9P2E3 1918 aaKnown RBP17.07■□□□□ 0.32
CXXC1-213ENST00000590234 RPTORQ8N122 1335 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 WDR19Q8NEZ3 1342 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 CCDC69A6NI79 296 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
CXXC1-213ENST00000590234 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
CXXC1-213ENST00000590234 LIFRP42702 1097 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 MAP3K21Q5TCX8 1036 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 OLFML2BQ68BL8 750 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
CXXC1-213ENST00000590234 ADGRF4Q8IZF3 695 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 ZNF654Q8IZM8 581 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 MAML3Q96JK9 1138 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.06■□□□□ 0.32
CXXC1-213ENST00000590234 HMX1Q9NP08 348 aaPredicted RBP17.06■□□□□ 0.32
CXXC1-213ENST00000590234 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
CXXC1-213ENST00000590234 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
CXXC1-213ENST00000590234 PALM3A6NDB9 673 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-213ENST00000590234 KLRF2D3W0D1 207 aa17.05■□□□□ 0.32
CXXC1-213ENST00000590234 DDAH1O94760 285 aa17.05■□□□□ 0.32
CXXC1-213ENST00000590234 GJB1P08034 283 aa17.05■□□□□ 0.32
CXXC1-213ENST00000590234 EXOSC10Q01780 885 aaKnown RBP17.05■□□□□ 0.32
CXXC1-213ENST00000590234 CACNB2Q08289 660 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-213ENST00000590234 CDC37Q16543 378 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-213ENST00000590234 ZNF792Q3KQV3 632 aa17.05■□□□□ 0.32
CXXC1-213ENST00000590234 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
CXXC1-213ENST00000590234 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
CXXC1-213ENST00000590234 USP26Q9BXU7 913 aa17.05■□□□□ 0.32
CXXC1-213ENST00000590234 PAK6Q9NQU5 681 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-213ENST00000590234 DIS3Q9Y2L1 958 aaKnown RBP17.05■□□□□ 0.32
CXXC1-213ENST00000590234 DNAJC25-GNG10A0A024R161 153 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
CXXC1-213ENST00000590234 EN2P19622 333 aaPredicted RBP17.04■□□□□ 0.32
CXXC1-213ENST00000590234 CYP2C19P33261 490 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 RGS19P49795 217 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 MUM1L1Q5H9M0 696 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 CTCFLQ8NI51 663 aaPredicted RBP17.04■□□□□ 0.32
CXXC1-213ENST00000590234 TCEANC2Q96MN5 208 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 MAP3K14Q99558 947 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 MYL10Q9BUA6 226 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 JMJD4Q9H9V9 463 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 VAT1LQ9HCJ6 419 aa17.04■□□□□ 0.32
CXXC1-213ENST00000590234 A1CFQ9NQ94 594 aaKnown RBP17.04■□□□□ 0.32
CXXC1-213ENST00000590234 KIAA0100Q14667 2235 aaKnown RBP17.04■□□□□ 0.32
CXXC1-213ENST00000590234 PFASO15067 1338 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 IGHA2P01877 340 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 CALM1P0DP23 149 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 CALM2P0DP24 149 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 CALM3P0DP25 149 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 PSMA5P28066 241 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 GJA8P48165 433 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 QRICH1Q2TAL8 776 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 BLOC1S2Q6QNY1 142 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 SGMS1Q86VZ5 419 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 U2AF1L4Q8WU68 220 aaKnown RBP17.03■□□□□ 0.32
CXXC1-213ENST00000590234 DEFB118Q96PH6 123 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 SLC12A7Q9Y666 1083 aa17.03■□□□□ 0.32
CXXC1-213ENST00000590234 POTEB2H3BUK9 544 aa17.02■□□□□ 0.32
CXXC1-213ENST00000590234 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.32
CXXC1-213ENST00000590234 SGPL1O95470 568 aa17.02■□□□□ 0.32
CXXC1-213ENST00000590234 CCND3P30281 292 aaPredicted RBP17.02■□□□□ 0.32
CXXC1-213ENST00000590234 KIF5BP33176 963 aa17.02■□□□□ 0.32
CXXC1-213ENST00000590234 USH1GQ495M9 461 aa17.02■□□□□ 0.32
CXXC1-213ENST00000590234 NSMFQ6X4W1 530 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms