RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 COPB2P35606 906 aa19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 PFKFB3Q16875 520 aaPredicted RBP19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 TEX2Q8IWB9 1127 aa19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 CMTR1Q8N1G2 835 aaKnown RBP19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 RGS22Q8NE09 1264 aa19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 CCDC12Q8WUD4 166 aaPredicted RBP19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 PHKBQ93100 1093 aa19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 PTPN18Q99952 460 aa19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 VAT1LQ9HCJ6 419 aa19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 V9GY48 417 aaPredicted RBP19.61■□□□□ 0.73
SCAMP4-211ENST00000588907 ICAM1P05362 532 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 SCG2P13521 617 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 PDCP20941 246 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 VEGFBP49765 207 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 HOMER1Q86YM7 354 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 ATG4CQ96DT6 458 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 PIGSQ96S52 555 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 AMNQ9BXJ7 453 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 CPVLQ9H3G5 476 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 CWC22Q9HCG8 908 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 RABGAP1Q9Y3P9 1069 aa19.6■□□□□ 0.73
SCAMP4-211ENST00000588907 IGF2BP3O00425 579 aaKnown RBP eCLIP19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 QRICH1Q2TAL8 776 aa19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 PPP1R18Q6NYC8 613 aa19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 FBXO11Q86XK2 927 aa19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 CCDC148Q8NFR7 591 aa19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 P2RX7Q99572 595 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 TEX13BQ9BXU2 312 aa19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 MAF1Q9H063 256 aa19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 ZFYVE28Q9HCC9 887 aa19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 SH3GLB2Q9NR46 395 aa19.59■□□□□ 0.73
SCAMP4-211ENST00000588907 JAK2O60674 1132 aa19.58■□□□□ 0.72
SCAMP4-211ENST00000588907 TAF1CQ15572 869 aaPredicted RBP19.58■□□□□ 0.72
SCAMP4-211ENST00000588907 SLC35G1Q2M3R5 365 aa19.58■□□□□ 0.72
SCAMP4-211ENST00000588907 TKFCQ3LXA3 575 aa19.58■□□□□ 0.72
SCAMP4-211ENST00000588907 GLT8D2Q9H1C3 349 aa19.58■□□□□ 0.72
SCAMP4-211ENST00000588907 BAZ2BQ9UIF8 2168 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-211ENST00000588907 ABCB11O95342 1321 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 CA12O43570 354 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 AOC2O75106 756 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 GJB2P29033 226 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 CCNA1P78396 465 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 TRIM29Q14134 588 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 HEATR3Q7Z4Q2 680 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 REPS2Q8NFH8 660 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 IPO9Q96P70 1041 aaKnown RBP19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 BARHL2Q9NY43 387 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 CCPG1Q9ULG6 757 aa19.57■□□□□ 0.72
SCAMP4-211ENST00000588907 CYP2C8P10632 490 aa19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 PKN1Q16512 942 aa19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 FAM110CQ1W6H9 321 aa19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 GALNT17Q6IS24 598 aa19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 CCDC174Q6PII3 467 aa19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 ALG1Q9BT22 464 aa19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 CFHR5Q9BXR6 569 aa19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 MORF4L1Q9UBU8 362 aa19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 ZNF214Q9UL59 606 aaPredicted RBP19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 MRPL11Q9Y3B7 192 aaKnown RBP19.56■□□□□ 0.72
SCAMP4-211ENST00000588907 COL11A1P12107 1806 aaPredicted RBP19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 TLR2O60603 784 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 SLC25A27O95847 323 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 FDPSP14324 419 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 STAT3P40763 770 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 HTRA3P83110 453 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 TMEM132BQ14DG7 1078 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 SAMD3Q8N6K7 520 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 GPRC5AQ8NFJ5 357 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 PIBF1Q8WXW3 757 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 SPATC1LQ9H0A9 340 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 SAGE1Q9NXZ1 904 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 FBXO40Q9UH90 709 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 PCDHA1Q9Y5I3 950 aa19.55■□□□□ 0.72
SCAMP4-211ENST00000588907 ZNF536O15090 1300 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 ADGRA2Q96PE1 1338 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 ESYT2A0FGR8 921 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 CALML3P27482 149 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 NAPAP54920 295 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 ERVK-9P63128 1117 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 ERVK-24P63145 666 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 MAP2K1Q02750 393 aaPredicted RBP19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 WWC2Q6AWC2 1192 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 SNRNP48Q6IEG0 339 aaKnown RBP19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 RIOX2Q8IUF8 465 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 SHCBP1Q8NEM2 672 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 C8orf76Q96K31 380 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 ZIC5Q96T25 663 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 PAGR1Q9BTK6 254 aa19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 RAVER2Q9HCJ3 691 aaKnown RBP19.54■□□□□ 0.72
SCAMP4-211ENST00000588907 hCG_1642624A0A1W2PR95 340 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 STXBP3O00186 592 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 GNA11P29992 359 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 PLS1Q14651 629 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 MCF2L2Q86YR7 1114 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 CPXCR1Q8N123 301 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 CHST13Q8NET6 341 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 BRMS1Q9HCU9 246 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms