RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 DNAJC25-GNG10A0A024R161 153 aa26.16■■□□□ 1.78
CAPNS1-205ENST00000588780 BMP1P13497 986 aa26.16■■□□□ 1.78
CAPNS1-205ENST00000588780 ARMCX2Q7L311 632 aa26.16■■□□□ 1.78
CAPNS1-205ENST00000588780 KCNQ1P51787 676 aa26.15■■□□□ 1.78
CAPNS1-205ENST00000588780 CXCL17Q6UXB2 119 aa26.15■■□□□ 1.78
CAPNS1-205ENST00000588780 PRPF38AQ8NAV1 312 aaKnown RBP26.15■■□□□ 1.78
CAPNS1-205ENST00000588780 RAVER2Q9HCJ3 691 aaKnown RBP26.15■■□□□ 1.78
CAPNS1-205ENST00000588780 BAZ2AQ9UIF9 1905 aaKnown RBP26.15■■□□□ 1.78
CAPNS1-205ENST00000588780 UMODL1Q5DID0 1318 aa26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 GTPBP6O43824 516 aaPredicted RBP26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 CD4P01730 458 aa26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 IFIT2P09913 472 aaKnown RBP26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 MYOGP15173 224 aa26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 SLFNL1Q499Z3 407 aa26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 HSP90AB4PQ58FF6 505 aa26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 CLASRPQ8N2M8 674 aaKnown RBP26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 KIFC2Q96AC6 838 aa26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.14■■□□□ 1.782e-6■■□□□ 12.4
CAPNS1-205ENST00000588780 SLC4A4Q9Y6R1 1079 aa26.14■■□□□ 1.78
CAPNS1-205ENST00000588780 HOXD11P31277 338 aaPredicted RBP26.13■■□□□ 1.77
CAPNS1-205ENST00000588780 TNFAIP2Q03169 654 aa26.13■■□□□ 1.77
CAPNS1-205ENST00000588780 CEP85Q6P2H3 762 aa26.13■■□□□ 1.77
CAPNS1-205ENST00000588780 RPUSD2Q8IZ73 545 aaKnown RBP26.13■■□□□ 1.77
CAPNS1-205ENST00000588780 STK11IPQ8N1F8 1099 aa26.13■■□□□ 1.77
CAPNS1-205ENST00000588780 ITGA7Q13683 1181 aa26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 CCDC144CPQ8IYA2 1237 aa26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 RHPN1Q8TCX5 695 aa26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 AP5M1Q9H0R1 490 aa26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 HOMER2Q9NSB8 354 aa26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 FBXO40Q9UH90 709 aa26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 ISY1Q9ULR0 285 aaKnown RBP26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 PCDHA11Q9Y5I1 949 aa26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 GBF1Q92538 1859 aa26.12■■□□□ 1.77
CAPNS1-205ENST00000588780 F5H6K3 240 aa26.11■■□□□ 1.77
CAPNS1-205ENST00000588780 CABYRO75952 493 aa26.11■■□□□ 1.77
CAPNS1-205ENST00000588780 ADD2P35612 726 aa26.11■■□□□ 1.77
CAPNS1-205ENST00000588780 KLRC3Q07444 240 aa26.11■■□□□ 1.77
CAPNS1-205ENST00000588780 PAG1Q9NWQ8 432 aa26.11■■□□□ 1.77
CAPNS1-205ENST00000588780 MCM3APO60318 1980 aa26.11■■□□□ 1.77
CAPNS1-205ENST00000588780 ZEB2O60315 1214 aa26.1■■□□□ 1.77
CAPNS1-205ENST00000588780 NDUFB10O96000 172 aa26.1■■□□□ 1.77
CAPNS1-205ENST00000588780 ATP2A2P16615 1042 aaKnown RBP26.1■■□□□ 1.77
CAPNS1-205ENST00000588780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.1■■□□□ 1.77
CAPNS1-205ENST00000588780 TRPV6Q9H1D0 765 aa26.1■■□□□ 1.77
CAPNS1-205ENST00000588780 MKNK2Q9HBH9 465 aa26.1■■□□□ 1.77
CAPNS1-205ENST00000588780 CHD9Q3L8U1 2897 aa26.1■■□□□ 1.77
CAPNS1-205ENST00000588780 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 CTR9Q6PD62 1173 aa26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 TLK2Q86UE8 772 aa26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 CHST13Q8NET6 341 aa26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 LRFN3Q9BTN0 628 aa26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 NOC4LQ9BVI4 516 aaKnown RBP26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 BOLA2Q9H3K6 86 aa26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 EPHX3Q9H6B9 360 aa26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 CERS4Q9HA82 394 aa26.09■■□□□ 1.77
CAPNS1-205ENST00000588780 RFXAPO00287 272 aa26.08■■□□□ 1.77
CAPNS1-205ENST00000588780 ATP2A1O14983 1001 aa26.08■■□□□ 1.77
CAPNS1-205ENST00000588780 ERC2O15083 957 aa26.08■■□□□ 1.77
CAPNS1-205ENST00000588780 CTAGE5O15320 804 aa26.08■■□□□ 1.77
CAPNS1-205ENST00000588780 FSCN1Q16658 493 aaKnown RBP26.08■■□□□ 1.77
CAPNS1-205ENST00000588780 TMEM67Q5HYA8 995 aa26.08■■□□□ 1.77
CAPNS1-205ENST00000588780 SCLYQ96I15 445 aa26.08■■□□□ 1.77
CAPNS1-205ENST00000588780 CLIP2Q9UDT6 1046 aa26.08■■□□□ 1.77
CAPNS1-205ENST00000588780 DYNC1LI2O43237 492 aaPredicted RBP26.07■■□□□ 1.76
CAPNS1-205ENST00000588780 CNTN2Q02246 1040 aa26.07■■□□□ 1.76
CAPNS1-205ENST00000588780 TMEM31Q5JXX7 168 aa26.07■■□□□ 1.76
CAPNS1-205ENST00000588780 FGD4Q96M96 766 aa26.07■■□□□ 1.76
CAPNS1-205ENST00000588780 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.07■■□□□ 1.76
CAPNS1-205ENST00000588780 NYAP2Q9P242 653 aa26.07■■□□□ 1.76
CAPNS1-205ENST00000588780 B4GALT4O60513 344 aa26.06■■□□□ 1.76
CAPNS1-205ENST00000588780 SLC43A3Q8NBI5 491 aa26.06■■□□□ 1.76
CAPNS1-205ENST00000588780 KIF1BPQ96EK5 621 aa26.06■■□□□ 1.76
CAPNS1-205ENST00000588780 WNT8AQ9H1J5 351 aa26.06■■□□□ 1.76
CAPNS1-205ENST00000588780 SLC38A10Q9HBR0 1119 aa26.06■■□□□ 1.76
CAPNS1-205ENST00000588780 ARPP21Q9UBL0 812 aaPredicted RBP26.06■■□□□ 1.76
CAPNS1-205ENST00000588780 CA3P07451 260 aa26.05■■□□□ 1.76
CAPNS1-205ENST00000588780 RLBP1P12271 317 aa26.05■■□□□ 1.76
CAPNS1-205ENST00000588780 PSMC6P62333 389 aa26.05■■□□□ 1.76
CAPNS1-205ENST00000588780 DEFB128Q7Z7B8 93 aa26.05■■□□□ 1.76
CAPNS1-205ENST00000588780 SEZ6LQ9BYH1 1024 aa26.05■■□□□ 1.76
CAPNS1-205ENST00000588780 FEM1BQ9UK73 627 aa26.05■■□□□ 1.76
CAPNS1-205ENST00000588780 MTCH2Q9Y6C9 303 aa26.05■■□□□ 1.76
CAPNS1-205ENST00000588780 PRRC2BQ5JSZ5 2229 aaKnown RBP26.04■■□□□ 1.76
CAPNS1-205ENST00000588780 MINDY4BA8MYZ0 360 aa26.04■■□□□ 1.76
CAPNS1-205ENST00000588780 KATNBL1Q9H079 304 aa26.04■■□□□ 1.76
CAPNS1-205ENST00000588780 ACAD9Q9H845 621 aa26.04■■□□□ 1.76
CAPNS1-205ENST00000588780 COG5Q9UP83 839 aa26.04■■□□□ 1.76
CAPNS1-205ENST00000588780 COG6Q9Y2V7 657 aa26.04■■□□□ 1.76
CAPNS1-205ENST00000588780 ASTN1O14525 1302 aa26.04■■□□□ 1.76
CAPNS1-205ENST00000588780 ASB14A6NK59 587 aa26.03■■□□□ 1.76
CAPNS1-205ENST00000588780 CHGBP05060 677 aa26.03■■□□□ 1.76
CAPNS1-205ENST00000588780 RASA1P20936 1047 aa26.03■■□□□ 1.76
CAPNS1-205ENST00000588780 ARIH1Q9Y4X5 557 aaPredicted RBP26.03■■□□□ 1.76
CAPNS1-205ENST00000588780 ACTN1P12814 892 aa26.02■■□□□ 1.76
CAPNS1-205ENST00000588780 OAZ1P54368 228 aa26.02■■□□□ 1.76
CAPNS1-205ENST00000588780 NKX3-2P78367 333 aa26.02■■□□□ 1.76
CAPNS1-205ENST00000588780 IKQ13123 557 aaPredicted RBP26.02■■□□□ 1.76
CAPNS1-205ENST00000588780 TTLL4Q14679 1199 aa26.02■■□□□ 1.76
CAPNS1-205ENST00000588780 UBE3CQ15386 1083 aa26.02■■□□□ 1.76
CAPNS1-205ENST00000588780 ZSCAN25Q6NSZ9 544 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms