RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
CACTIN-206ENST00000588749 PAWRQ96IZ0 340 aaKnown RBP17.01■□□□□ 0.31
CACTIN-206ENST00000588749 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
CACTIN-206ENST00000588749 KAT14Q9H8E8 782 aa17.01■□□□□ 0.31
CACTIN-206ENST00000588749 RNF146Q9NTX7 359 aa17.01■□□□□ 0.31
CACTIN-206ENST00000588749 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
CACTIN-206ENST00000588749 TAF6LQ9Y6J9 622 aa17.01■□□□□ 0.31
CACTIN-206ENST00000588749 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
CACTIN-206ENST00000588749 SNHG28P0DPA3 235 aa17■□□□□ 0.31
CACTIN-206ENST00000588749 ALAS1P13196 640 aa17■□□□□ 0.31
CACTIN-206ENST00000588749 BTNL9Q6UXG8 535 aa17■□□□□ 0.31
CACTIN-206ENST00000588749 MAP4K1Q92918 833 aa17■□□□□ 0.31
CACTIN-206ENST00000588749 HTATIP2Q9BUP3 242 aa17■□□□□ 0.31
CACTIN-206ENST00000588749 RANBP17Q9H2T7 1088 aaKnown RBP17■□□□□ 0.31
CACTIN-206ENST00000588749 ACAD9Q9H845 621 aa17■□□□□ 0.31
CACTIN-206ENST00000588749 DDX20Q9UHI6 824 aaKnown RBP17■□□□□ 0.31
CACTIN-206ENST00000588749 DIS3Q9Y2L1 958 aaKnown RBP17■□□□□ 0.31
CACTIN-206ENST00000588749 RBM8AQ9Y5S9 174 aaKnown RBP17■□□□□ 0.31
CACTIN-206ENST00000588749 DNAJC25-GNG10A0A024R161 153 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 GOLGA8HP0CJ92 632 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 TAL1P17542 331 aaPredicted RBP16.99■□□□□ 0.31
CACTIN-206ENST00000588749 TKFCQ3LXA3 575 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 PRAMEF19Q5SWL8 479 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 CYB5R4Q7L1T6 521 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
CACTIN-206ENST00000588749 NECAB2Q7Z6G3 386 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 ANKS1AQ92625 1134 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 DPF3Q92784 378 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 TINF2Q9BSI4 451 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 CCPG1Q9ULG6 757 aa16.99■□□□□ 0.31
CACTIN-206ENST00000588749 MCM3APO60318 1980 aa16.98■□□□□ 0.31
CACTIN-206ENST00000588749 E7EWF7 191 aa16.98■□□□□ 0.31
CACTIN-206ENST00000588749 MSCO60682 206 aa16.98■□□□□ 0.31
CACTIN-206ENST00000588749 ICAM1P05362 532 aa16.98■□□□□ 0.31
CACTIN-206ENST00000588749 MNX1P50219 401 aaPredicted RBP16.98■□□□□ 0.31
CACTIN-206ENST00000588749 GPATCH4Q5T3I0 446 aaKnown RBP16.98■□□□□ 0.31
CACTIN-206ENST00000588749 IFIT1BQ5T764 474 aaKnown RBP16.98■□□□□ 0.31
CACTIN-206ENST00000588749 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
CACTIN-206ENST00000588749 RALYLQ86SE5 291 aaKnown RBP16.98■□□□□ 0.31
CACTIN-206ENST00000588749 TRERF1Q96PN7 1200 aa16.98■□□□□ 0.31
CACTIN-206ENST00000588749 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
CACTIN-206ENST00000588749 ANO1Q5XXA6 986 aa16.97■□□□□ 0.31
CACTIN-206ENST00000588749 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
CACTIN-206ENST00000588749 CPVLQ9H3G5 476 aa16.97■□□□□ 0.31
CACTIN-206ENST00000588749 C11orf49Q9H6J7 331 aa16.97■□□□□ 0.31
CACTIN-206ENST00000588749 ANO2Q9NQ90 1003 aa16.97■□□□□ 0.31
CACTIN-206ENST00000588749 A1CFQ9NQ94 594 aaKnown RBP16.97■□□□□ 0.31
CACTIN-206ENST00000588749 ALPK3Q96L96 1907 aa16.97■□□□□ 0.31
CACTIN-206ENST00000588749 POTEB2H3BUK9 544 aa16.96■□□□□ 0.31
CACTIN-206ENST00000588749 SEPT4O43236 478 aa16.96■□□□□ 0.31
CACTIN-206ENST00000588749 SEC23AQ15436 765 aa16.96■□□□□ 0.31
CACTIN-206ENST00000588749 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.31
CACTIN-206ENST00000588749 MSL3Q8N5Y2 521 aaKnown RBP16.96■□□□□ 0.31
CACTIN-206ENST00000588749 UBA5Q9GZZ9 404 aa16.96■□□□□ 0.31
CACTIN-206ENST00000588749 NRBP1Q9UHY1 535 aa16.96■□□□□ 0.31
CACTIN-206ENST00000588749 CNPY2Q9Y2B0 182 aa16.96■□□□□ 0.31
CACTIN-206ENST00000588749 IFIT3O14879 490 aaKnown RBP16.95■□□□□ 0.3
CACTIN-206ENST00000588749 CDC45O75419 566 aa16.95■□□□□ 0.3
CACTIN-206ENST00000588749 CNTN2Q02246 1040 aa16.95■□□□□ 0.3
CACTIN-206ENST00000588749 ASPRV1Q53RT3 343 aa16.95■□□□□ 0.3
CACTIN-206ENST00000588749 CASC1Q6TDU7 716 aa16.95■□□□□ 0.3
CACTIN-206ENST00000588749 CHST3Q7LGC8 479 aa16.95■□□□□ 0.3
CACTIN-206ENST00000588749 ZNF467Q7Z7K2 595 aaPredicted RBP16.95■□□□□ 0.3
CACTIN-206ENST00000588749 FGD4Q96M96 766 aa16.95■□□□□ 0.3
CACTIN-206ENST00000588749 PFASO15067 1338 aa16.95■□□□□ 0.3
CACTIN-206ENST00000588749 SYNGAP1Q96PV0 1343 aa16.95■□□□□ 0.3
CACTIN-206ENST00000588749 ERICH2A1L162 156 aa16.94■□□□□ 0.3
CACTIN-206ENST00000588749 H0YGN5 161 aa16.94■□□□□ 0.3
CACTIN-206ENST00000588749 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
CACTIN-206ENST00000588749 PARP1P09874 1014 aaKnown RBP16.94■□□□□ 0.3
CACTIN-206ENST00000588749 MAMDC4Q6UXC1 1216 aa16.94■□□□□ 0.3
CACTIN-206ENST00000588749 NSMFQ6X4W1 530 aa16.94■□□□□ 0.3
CACTIN-206ENST00000588749 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
CACTIN-206ENST00000588749 ZHX1Q9UKY1 873 aaPredicted RBP16.94■□□□□ 0.3
CACTIN-206ENST00000588749 MYH6P13533 1939 aa16.94■□□□□ 0.3
CACTIN-206ENST00000588749 WDR19Q8NEZ3 1342 aa16.94■□□□□ 0.3
CACTIN-206ENST00000588749 NFIBO00712 420 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 SLC27A2O14975 620 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
CACTIN-206ENST00000588749 EVI5O60447 810 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 SNAI1O95863 264 aaPredicted RBP16.93■□□□□ 0.3
CACTIN-206ENST00000588749 MYCNP04198 464 aaPredicted RBP16.93■□□□□ 0.3
CACTIN-206ENST00000588749 ZNF865P0CJ78 1059 aaPredicted RBP16.93■□□□□ 0.3
CACTIN-206ENST00000588749 COL6A1P12109 1028 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 ANTXR2P58335 489 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 WTAPQ15007 396 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
CACTIN-206ENST00000588749 CDC37Q16543 378 aaPredicted RBP16.93■□□□□ 0.3
CACTIN-206ENST00000588749 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 MB21D2Q8IYB1 491 aaPredicted RBP16.93■□□□□ 0.3
CACTIN-206ENST00000588749 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.93■□□□□ 0.3
CACTIN-206ENST00000588749 CYP39A1Q9NYL5 469 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 PNMA2Q9UL42 364 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 LCTP09848 1927 aa16.93■□□□□ 0.3
CACTIN-206ENST00000588749 SOWAHBA6NEL2 793 aa16.92■□□□□ 0.3
CACTIN-206ENST00000588749 DNM1LO00429 736 aa16.92■□□□□ 0.3
CACTIN-206ENST00000588749 RARBP10826 455 aa16.92■□□□□ 0.3
CACTIN-206ENST00000588749 AKR1A1P14550 325 aa16.92■□□□□ 0.3
CACTIN-206ENST00000588749 USH1GQ495M9 461 aa16.92■□□□□ 0.3
CACTIN-206ENST00000588749 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms