RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 CTDP1Q9Y5B0 961 aaPredicted RBP12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 MYPNQ86TC9 1320 aa12.12□□□□□ -0.47
NEDD4L-224ENST00000588712 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 GOLGA6L4A6NEF3 574 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L15C9J2P7 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L13C9JLJ4 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L11C9JVI0 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L18D6R9N7 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L22D6RA61 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L17D6RBQ6 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L19D6RCP7 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L20D6RJB6 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 USP17L24Q0WX57 530 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 KIAA1755Q5JYT7 1200 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 CCDC84Q86UT8 332 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 PROCA1Q8NCQ7 364 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 KCNG4Q8TDN1 519 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 CUL5Q93034 780 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 RPAP3Q9H6T3 665 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 NMRK2Q9NPI5 230 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 RCOR1Q9UKL0 485 aa12.11□□□□□ -0.47
NEDD4L-224ENST00000588712 KIF28PB7ZC32 967 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 FIBPO43427 364 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 ZBED4O75132 1171 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 MBD3O95983 291 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 HMGCS2P54868 508 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 PABPC4Q13310 644 aaKnown RBP eCLIP12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 COG2Q14746 738 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 FASTKD5Q7L8L6 764 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 PSTPIP2Q9H939 334 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 GBA2Q9HCG7 927 aaPredicted RBP12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 FZD1Q9UP38 647 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 FLOT1O75955 427 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 NASPP49321 788 aaPredicted RBP12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 OAZ1P54368 228 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 UBE2HP62256 183 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 NPY5RQ15761 445 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 DLK2Q6UY11 383 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 TNFRSF25Q93038 417 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 COA7Q96BR5 231 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 MAF1Q9H063 256 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 ZNF408Q9H9D4 720 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 PPP1R9AQ9ULJ8 1098 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 KCNH4Q9UQ05 1017 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 MRPL11Q9Y3B7 192 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 UTRNP46939 3433 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 ABCB11O95342 1321 aa12.1□□□□□ -0.47
NEDD4L-224ENST00000588712 PAPPA2Q9BXP8 1791 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 PHIPQ8WWQ0 1821 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 M0R2N6 131 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 FOSP01100 380 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 NR5A1Q13285 461 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 STK38Q15208 465 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 SF3A1Q15459 793 aaKnown RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 CATSPERGQ6ZRH7 1159 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 LEO1Q8WVC0 666 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 USP28Q96RU2 1077 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 NAP1L4Q99733 375 aaKnown RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 GPBP1L1Q9HC44 474 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 PCDHA6Q9UN73 950 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 PCDHA8Q9Y5H6 950 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 MORC2Q9Y6X9 1032 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 A0A0G2JLL6 359 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 ICAM1P05362 532 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 ORC2Q13416 577 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 NONOQ15233 471 aaKnown RBP eCLIP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 PRRT2Q7Z6L0 340 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 SHISA4Q96DD7 197 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 OTUD5Q96G74 571 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 SLC38A10Q9HBR0 1119 aa12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 MAP3K20Q9NYL2 800 aaKnown RBP12.09□□□□□ -0.47
NEDD4L-224ENST00000588712 TCHHQ07283 1943 aa12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 MYH15Q9Y2K3 1946 aa12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 TRAF5O00463 557 aa12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 IRF6O14896 467 aa12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 PPP1R11O60927 126 aaPredicted RBP12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 PPP6R2O75170 966 aa12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 HOXA7P31268 230 aaPredicted RBP12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 AP3B2Q13367 1082 aa12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 SNAPC2Q13487 334 aa12.08□□□□□ -0.48
NEDD4L-224ENST00000588712 SLC39A14Q15043 492 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms