RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 CHRDL2Q6WN34 429 aa27.43■■□□□ 1.98
LSM7-204ENST00000587502 KRT23Q9C075 422 aa27.43■■□□□ 1.98
LSM7-204ENST00000587502 CNNM2Q9H8M5 875 aa27.43■■□□□ 1.98
LSM7-204ENST00000587502 PNMA2Q9UL42 364 aa27.43■■□□□ 1.98
LSM7-204ENST00000587502 ZNF536O15090 1300 aa27.42■■□□□ 1.98
LSM7-204ENST00000587502 LAMA4Q16363 1823 aa27.42■■□□□ 1.98
LSM7-204ENST00000587502 KBTBD13C9JR72 458 aa27.42■■□□□ 1.98
LSM7-204ENST00000587502 RARBP10826 455 aa27.42■■□□□ 1.98
LSM7-204ENST00000587502 C7orf61Q8IZ16 206 aa27.42■■□□□ 1.98
LSM7-204ENST00000587502 AGBL1Q96MI9 1066 aa27.42■■□□□ 1.98
LSM7-204ENST00000587502 SENP6Q9GZR1 1112 aaPredicted RBP27.42■■□□□ 1.98
LSM7-204ENST00000587502 HOMER2Q9NSB8 354 aa27.42■■□□□ 1.98
LSM7-204ENST00000587502 RNF146Q9NTX7 359 aa27.42■■□□□ 1.98
LSM7-204ENST00000587502 PDHBP11177 359 aa27.41■■□□□ 1.98
LSM7-204ENST00000587502 AKR1A1P14550 325 aa27.41■■□□□ 1.98
LSM7-204ENST00000587502 SYDE2Q5VT97 1194 aa27.41■■□□□ 1.98
LSM7-204ENST00000587502 CCDC174Q6PII3 467 aa27.41■■□□□ 1.98
LSM7-204ENST00000587502 TRERF1Q96PN7 1200 aa27.41■■□□□ 1.98
LSM7-204ENST00000587502 RANBP17Q9H2T7 1088 aaKnown RBP27.41■■□□□ 1.98
LSM7-204ENST00000587502 ALPK3Q96L96 1907 aa27.4■■□□□ 1.98
LSM7-204ENST00000587502 KDM4AO75164 1064 aa27.4■■□□□ 1.98
LSM7-204ENST00000587502 ALAS1P13196 640 aa27.4■■□□□ 1.98
LSM7-204ENST00000587502 CHMLP26374 656 aa27.4■■□□□ 1.98
LSM7-204ENST00000587502 CENPQQ7L2Z9 268 aaPredicted RBP27.4■■□□□ 1.98
LSM7-204ENST00000587502 ICAM1P05362 532 aa27.39■■□□□ 1.98
LSM7-204ENST00000587502 ZNF865P0CJ78 1059 aaPredicted RBP27.39■■□□□ 1.98
LSM7-204ENST00000587502 SNHG28P0DPA3 235 aa27.39■■□□□ 1.98
LSM7-204ENST00000587502 GPATCH4Q5T3I0 446 aaKnown RBP27.39■■□□□ 1.98
LSM7-204ENST00000587502 GJC2Q5T442 439 aaPredicted RBP27.39■■□□□ 1.98
LSM7-204ENST00000587502 ANO1Q5XXA6 986 aa27.39■■□□□ 1.98
LSM7-204ENST00000587502 RASGRP2Q7LDG7 609 aa27.39■■□□□ 1.98
LSM7-204ENST00000587502 ANKS1AQ92625 1134 aa27.39■■□□□ 1.98
LSM7-204ENST00000587502 CCPG1Q9ULG6 757 aa27.39■■□□□ 1.98
LSM7-204ENST00000587502 B4E1Z4 1266 aa27.38■■□□□ 1.97
LSM7-204ENST00000587502 POTEB2H3BUK9 544 aa27.38■■□□□ 1.97
LSM7-204ENST00000587502 ZNF543Q08ER8 600 aa27.38■■□□□ 1.97
LSM7-204ENST00000587502 TTBK2Q6IQ55 1244 aa27.38■■□□□ 1.97
LSM7-204ENST00000587502 ZSCAN10Q96SZ4 725 aaPredicted RBP27.38■■□□□ 1.97
LSM7-204ENST00000587502 ZKSCAN3Q9BRR0 538 aa27.38■■□□□ 1.97
LSM7-204ENST00000587502 GPCPD1Q9NPB8 672 aa27.38■■□□□ 1.97
LSM7-204ENST00000587502 XPNPEP3Q9NQH7 507 aa27.38■■□□□ 1.97
LSM7-204ENST00000587502 FAM184BQ9ULE4 1060 aa27.38■■□□□ 1.97
LSM7-204ENST00000587502 FRMPD2Q68DX3 1309 aaPredicted RBP27.38■■□□□ 1.97
LSM7-204ENST00000587502 SNAI1O95863 264 aaPredicted RBP27.37■■□□□ 1.97
LSM7-204ENST00000587502 TAL1P17542 331 aaPredicted RBP27.37■■□□□ 1.97
LSM7-204ENST00000587502 SLC16A2P36021 539 aa27.37■■□□□ 1.97
LSM7-204ENST00000587502 LRRC41Q15345 812 aa27.37■■□□□ 1.97
LSM7-204ENST00000587502 LRRC26Q2I0M4 334 aa27.37■■□□□ 1.97
LSM7-204ENST00000587502 RNF180Q86T96 592 aa27.37■■□□□ 1.97
LSM7-204ENST00000587502 IL25Q9H293 177 aa27.37■■□□□ 1.97
LSM7-204ENST00000587502 ABHD16BQ9H3Z7 469 aa27.37■■□□□ 1.97
LSM7-204ENST00000587502 KAT14Q9H8E8 782 aa27.37■■□□□ 1.97
LSM7-204ENST00000587502 A1CFQ9NQ94 594 aaKnown RBP27.37■■□□□ 1.97
LSM7-204ENST00000587502 ZSWIM5Q9P217 1185 aa27.37■■□□□ 1.97
LSM7-204ENST00000587502 SNAP25P60880 206 aa27.36■■□□□ 1.97
LSM7-204ENST00000587502 FAM133AQ8N9E0 248 aa27.36■■□□□ 1.97
LSM7-204ENST00000587502 PNMA1Q8ND90 353 aa27.36■■□□□ 1.97
LSM7-204ENST00000587502 UBAC1Q9BSL1 405 aa27.36■■□□□ 1.97
LSM7-204ENST00000587502 PRO3102Q9H379 93 aa27.36■■□□□ 1.97
LSM7-204ENST00000587502 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.36■■□□□ 1.97
LSM7-204ENST00000587502 RBM27Q9P2N5 1060 aaKnown RBP27.36■■□□□ 1.97
LSM7-204ENST00000587502 U3KPZ7 1027 aaPredicted RBP27.36■■□□□ 1.97
LSM7-204ENST00000587502 SMCHD1A6NHR9 2005 aa27.36■■□□□ 1.97
LSM7-204ENST00000587502 A0A1W2PPC1 479 aa27.35■■□□□ 1.97
LSM7-204ENST00000587502 ASB14A6NK59 587 aa27.35■■□□□ 1.97
LSM7-204ENST00000587502 MYCNP04198 464 aaPredicted RBP27.35■■□□□ 1.97
LSM7-204ENST00000587502 TRDNQ13061 729 aa27.35■■□□□ 1.97
LSM7-204ENST00000587502 ACVR2BQ13705 512 aa27.35■■□□□ 1.97
LSM7-204ENST00000587502 CCDC136Q96JN2 1154 aa27.35■■□□□ 1.97
LSM7-204ENST00000587502 ZHX1Q9UKY1 873 aaPredicted RBP27.35■■□□□ 1.97
LSM7-204ENST00000587502 ZMYND8Q9ULU4 1186 aaPredicted RBP27.35■■□□□ 1.97
LSM7-204ENST00000587502 DNAH12Q6ZR08 3092 aa27.35■■□□□ 1.97
LSM7-204ENST00000587502 ARMCX2Q7L311 632 aa27.34■■□□□ 1.97
LSM7-204ENST00000587502 FGD4Q96M96 766 aa27.34■■□□□ 1.97
LSM7-204ENST00000587502 TRIOBPQ9H2D6 2365 aa27.34■■□□□ 1.97
LSM7-204ENST00000587502 RANBP2P49792 3224 aaKnown RBP27.33■■□□□ 1.97
LSM7-204ENST00000587502 SGSM2O43147 1006 aa27.33■■□□□ 1.97
LSM7-204ENST00000587502 CNTN2Q02246 1040 aa27.33■■□□□ 1.97
LSM7-204ENST00000587502 ENAHQ8N8S7 591 aaPredicted RBP27.33■■□□□ 1.97
LSM7-204ENST00000587502 CYP39A1Q9NYL5 469 aa27.33■■□□□ 1.97
LSM7-204ENST00000587502 TNKSO95271 1327 aa27.33■■□□□ 1.97
LSM7-204ENST00000587502 BMP8BP34820 402 aa27.32■■□□□ 1.96
LSM7-204ENST00000587502 MUM1L1Q5H9M0 696 aa27.32■■□□□ 1.96
LSM7-204ENST00000587502 ERICH6BQ5W0A0 696 aa27.32■■□□□ 1.96
LSM7-204ENST00000587502 CCDC144CPQ8IYA2 1237 aa27.32■■□□□ 1.96
LSM7-204ENST00000587502 DUSP11O75319 330 aaKnown RBP27.31■■□□□ 1.96
LSM7-204ENST00000587502 PGK1P00558 417 aa27.31■■□□□ 1.96
LSM7-204ENST00000587502 ATN1P54259 1190 aaPredicted RBP27.31■■□□□ 1.96
LSM7-204ENST00000587502 ASPRV1Q53RT3 343 aa27.31■■□□□ 1.96
LSM7-204ENST00000587502 NSMFQ6X4W1 530 aa27.31■■□□□ 1.96
LSM7-204ENST00000587502 SLC39A5Q6ZMH5 540 aa27.31■■□□□ 1.96
LSM7-204ENST00000587502 TSEN34Q9BSV6 310 aaKnown RBP27.31■■□□□ 1.96
LSM7-204ENST00000587502 PHF24Q9UPV7 400 aa27.31■■□□□ 1.96
LSM7-204ENST00000587502 WDR19Q8NEZ3 1342 aa27.31■■□□□ 1.96
LSM7-204ENST00000587502 SYN1P17600 705 aa27.3■■□□□ 1.96
LSM7-204ENST00000587502 ADCYAP1R1P41586 468 aa27.3■■□□□ 1.96
LSM7-204ENST00000587502 FXR1P51114 621 aaKnown RBP eCLIP27.3■■□□□ 1.96
LSM7-204ENST00000587502 PTH1RQ03431 593 aa27.3■■□□□ 1.96
LSM7-204ENST00000587502 IFIT1BQ5T764 474 aaKnown RBP27.3■■□□□ 1.96
LSM7-204ENST00000587502 GDF15Q99988 308 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms