RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 SPC25Q9HBM1 224 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 ADAMTS5Q9UNA0 930 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 TMX2Q9Y320 296 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 PCDHGA4Q9Y5G9 962 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 XIRP2A4UGR9 3374 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 BDP1A6H8Y1 2624 aa9.22□□□□□ -0.93
CCDC47-205ENST00000582331 MAGEB6P1A0A0J9YX57 407 aa9.22□□□□□ -0.93
CCDC47-205ENST00000582331 A0A0U1RQG5 324 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 MYADML2A6NDP7 307 aa9.22□□□□□ -0.93
CCDC47-205ENST00000582331 SNAI1O95863 264 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 ASGR1P07306 291 aa9.22□□□□□ -0.93
CCDC47-205ENST00000582331 C6orf222P0C671 652 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 CST5P28325 142 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 CYP2C18P33260 490 aa9.22□□□□□ -0.93
CCDC47-205ENST00000582331 SKIV2LQ15477 1246 aaKnown RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 TMEM31Q5JXX7 168 aa9.22□□□□□ -0.93
CCDC47-205ENST00000582331 FAM126BQ8IXS8 530 aa9.22□□□□□ -0.93
CCDC47-205ENST00000582331 TRMT2AQ8IZ69 625 aaKnown RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 KHSRPQ92945 711 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 RIOK1Q9BRS2 568 aaKnown RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 CRNKL1Q9BZJ0 848 aaKnown RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 CCDC8Q9H0W5 538 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 MCM9Q9NXL9 1143 aa9.22□□□□□ -0.93
CCDC47-205ENST00000582331 DBNLQ9UJU6 430 aaKnown RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 ZHX1Q9UKY1 873 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 TCF20Q9UGU0 1960 aaKnown RBP9.22□□□□□ -0.93
CCDC47-205ENST00000582331 CHD7Q9P2D1 2997 aa9.21□□□□□ -0.93
CCDC47-205ENST00000582331 VWA5AO00534 786 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 ERC2O15083 957 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 SURF6O75683 361 aaKnown RBP9.21□□□□□ -0.94
CCDC47-205ENST00000582331 KCNQ1P51787 676 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 ICA1Q05084 483 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 ACVR2BQ13705 512 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 GNASQ5JWF2 1037 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 PPP2R2DQ66LE6 453 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 MAMDC4Q6UXC1 1216 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 OTOP2Q7RTS6 562 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 PLPP6Q8IY26 295 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 PTCD2Q8WV60 388 aaKnown RBP9.21□□□□□ -0.94
CCDC47-205ENST00000582331 DDX11Q96FC9 970 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 ANTXR1Q9H6X2 564 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 FBXO28Q9NVF7 368 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 SWAP70Q9UH65 585 aa9.21□□□□□ -0.94
CCDC47-205ENST00000582331 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
CCDC47-205ENST00000582331 GTPBP6O43824 516 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-205ENST00000582331 CD4P01730 458 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 NUDT7P0C024 238 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 AKR1B1P15121 316 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 RABGGTBP53611 331 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 RARSP54136 660 aaKnown RBP9.2□□□□□ -0.94
CCDC47-205ENST00000582331 GJA9P57773 515 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 CLEC10AQ8IUN9 316 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 RPUSD2Q8IZ73 545 aaKnown RBP9.2□□□□□ -0.94
CCDC47-205ENST00000582331 DYNLL2Q96FJ2 89 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 CCDC17Q96LX7 622 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 UPF3AQ9H1J1 476 aaKnown RBP9.2□□□□□ -0.94
CCDC47-205ENST00000582331 HIPK3Q9H422 1215 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 TLR7Q9NYK1 1049 aaKnown RBP9.2□□□□□ -0.94
CCDC47-205ENST00000582331 ZNF214Q9UL59 606 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-205ENST00000582331 PPP1R9AQ9ULJ8 1098 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 PCDHA11Q9Y5I1 949 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 SLC4A7Q9Y6M7 1214 aa9.2□□□□□ -0.94
CCDC47-205ENST00000582331 DNAJC25-GNG10A0A024R161 153 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 TLL1O43897 1013 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 GPR37L1O60883 481 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 BCAR3O75815 825 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 CYP2D6P10635 497 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 EEF2P13639 858 aaKnown RBP9.19□□□□□ -0.94
CCDC47-205ENST00000582331 MYOGP15173 224 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 POU3F3P20264 500 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-205ENST00000582331 ATP8B2P98198 1209 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 CCDC144BQ3MJ40 725 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 REPS2Q8NFH8 660 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 SSH3Q8TE77 659 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 SDR42E1Q8WUS8 393 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 EAF2Q96CJ1 260 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-205ENST00000582331 TEX13BQ9BXU2 312 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 ABHD16BQ9H3Z7 469 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 GOPCQ9HD26 462 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 DCP1AQ9NPI6 582 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-205ENST00000582331 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-205ENST00000582331 COG5Q9UP83 839 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 MTCH2Q9Y6C9 303 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 MYO9BQ13459 2157 aa9.19□□□□□ -0.94
CCDC47-205ENST00000582331 RFXAPO00287 272 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 ADCY6O43306 1168 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 RAD21O60216 631 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 COL11A1P12107 1806 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-205ENST00000582331 SLC4A3P48751 1232 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 CCL23P55773 120 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 DSG2Q14126 1118 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 TTF1Q15361 905 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-205ENST00000582331 UMODL1Q5DID0 1318 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 FAM83BQ5T0W9 1011 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 SLC9C2Q5TAH2 1124 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 SNRNP48Q6IEG0 339 aaKnown RBP9.18□□□□□ -0.94
CCDC47-205ENST00000582331 SLC43A3Q8NBI5 491 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 KANSL2Q9H9L4 492 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 NOP58Q9Y2X3 529 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms