RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 TKFCQ3LXA3 575 aa17.29■□□□□ 0.36
CDC42EP4-208ENST00000582303 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
CDC42EP4-208ENST00000582303 LRRC47Q8N1G4 583 aaKnown RBP17.29■□□□□ 0.36
CDC42EP4-208ENST00000582303 VTI1AQ96AJ9 217 aa17.29■□□□□ 0.36
CDC42EP4-208ENST00000582303 GMCL1Q96IK5 515 aa17.29■□□□□ 0.36
CDC42EP4-208ENST00000582303 CDX2Q99626 313 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP4-208ENST00000582303 MYH7P12883 1935 aa17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 ASB14A6NK59 587 aa17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 TMEM232C9JQI7 657 aa17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 TLR3O15455 904 aaKnown RBP17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 GJA9P57773 515 aa17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 TFAP4Q01664 338 aa17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 PPARAQ07869 468 aa17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 CCDC144BQ3MJ40 725 aa17.28■□□□□ 0.36
CDC42EP4-208ENST00000582303 PARP14Q460N5 1801 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 A0A0U1RQG5 324 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 PLA2G6O60733 806 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 TIMP1P01033 207 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 GNASQ5JWF2 1037 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 CCSAPQ6IQ19 270 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 ARMCX2Q7L311 632 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 STAG1Q8WVM7 1258 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 LENG1Q96BZ8 264 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 SEZ6LQ9BYH1 1024 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 HOMER2Q9NSB8 354 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 STX8Q9UNK0 236 aa17.27■□□□□ 0.36
CDC42EP4-208ENST00000582303 LTBP2Q14767 1821 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 GREB1LQ9C091 1923 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 TSPY2A6NKD2 308 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 CABYRO75952 493 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 ASGR1P07306 291 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 PPIGQ13427 754 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 MFSD5Q6N075 450 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 CCDC144CPQ8IYA2 1237 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 TMEM199Q8N511 208 aa17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 MAFAQ8NHW3 353 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 UPF3AQ9H1J1 476 aaKnown RBP17.26■□□□□ 0.35
CDC42EP4-208ENST00000582303 ZEB2O60315 1214 aa17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 FOSL2P15408 326 aa17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 MX1P20591 662 aa17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 ITGB8P26012 769 aa17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 TICAM2Q86XR7 235 aa17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 PI4K2BQ8TCG2 481 aa17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 RNF146Q9NTX7 359 aa17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 TBX21Q9UL17 535 aa17.25■□□□□ 0.35
CDC42EP4-208ENST00000582303 COL11A1P12107 1806 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 ARVCFO00192 962 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 CDK7P50613 346 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 NKX3-2P78367 333 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 TNFAIP2Q03169 654 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 RCSD1Q6JBY9 416 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 PSRC1Q6PGN9 363 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 FAM133AQ8N9E0 248 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 TRERF1Q96PN7 1200 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 AP5M1Q9H0R1 490 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 MTIF3Q9H2K0 278 aaKnown RBP17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 A1CFQ9NQ94 594 aaKnown RBP17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 PNMA2Q9UL42 364 aa17.24■□□□□ 0.35
CDC42EP4-208ENST00000582303 MCCP23508 829 aa17.23■□□□□ 0.35
CDC42EP4-208ENST00000582303 SEC62Q99442 399 aaKnown RBP17.23■□□□□ 0.35
CDC42EP4-208ENST00000582303 ZNFX1Q9P2E3 1918 aaKnown RBP17.23■□□□□ 0.35
CDC42EP4-208ENST00000582303 MYADML2A6NDP7 307 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 ALAS1P13196 640 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 DNAJB2P25686 324 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 MYLIPQ8WY64 445 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 EVI5LQ96CN4 794 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 COL25A1Q9BXS0 654 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 TTYH1Q9H313 450 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 ANAPC4Q9UJX5 808 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 Q9Y3F1 56 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 PLXNA1Q9UIW2 1896 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 CDH23Q9H251 3354 aa17.22■□□□□ 0.35
CDC42EP4-208ENST00000582303 SMCHD1A6NHR9 2005 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 LOC102724159A0A0B4J2E5 919 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 EPHB4P54760 987 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 CNTN2Q02246 1040 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 PWP2Q15269 919 aaKnown RBP17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 IQSEC1Q6DN90 963 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 TIFAQ96CG3 184 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 FGD4Q96M96 766 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 AGBL1Q96MI9 1066 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 CCPG1Q9ULG6 757 aa17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDC42EP4-208ENST00000582303 VCANP13611 3396 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 ORC4O43929 436 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 ICAM1P05362 532 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 FSCN1Q16658 493 aaKnown RBP17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 KCTD1Q719H9 257 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms