RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NOM1Q5C9Z4 860 aaKnown RBP12.08□□□□□ -0.48
CCDC47-203ENST00000580986 SYDE2Q5VT97 1194 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 TEX2Q8IWB9 1127 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 FAM177A1Q8N128 213 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-203ENST00000580986 DNAJC5GQ8N7S2 189 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 TMX3Q96JJ7 454 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 NUP88Q99567 741 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-203ENST00000580986 LLPHQ9BRT6 129 aaKnown RBP12.08□□□□□ -0.48
CCDC47-203ENST00000580986 RNF26Q9BY78 433 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-203ENST00000580986 MAF1Q9H063 256 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
CCDC47-203ENST00000580986 SAGE1Q9NXZ1 904 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 STK36Q9NRP7 1315 aa12.08□□□□□ -0.48
CCDC47-203ENST00000580986 hCG_1984214I3L0E3 225 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-203ENST00000580986 VWA5AO00534 786 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 CA12O43570 354 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 AOC2O75106 756 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 CDC27P30260 824 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 HTRA3P83110 453 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 MAP2K1Q02750 393 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-203ENST00000580986 CUL4AQ13619 759 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 ZNF713Q8N859 430 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-203ENST00000580986 SLC38A10Q9HBR0 1119 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 FBXO28Q9NVF7 368 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-203ENST00000580986 MORF4L1Q9UBU8 362 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 PRR12Q9ULL5 1215 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-203ENST00000580986 CNTNAP5Q8WYK1 1306 aa12.07□□□□□ -0.48
CCDC47-203ENST00000580986 COL11A1P12107 1806 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-203ENST00000580986 CEP350Q5VT06 3117 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 CPLX1O14810 134 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 CYTH3O43739 400 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 TLR2O60603 784 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 PLEKHA8P1O95397 391 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 LARGE1O95461 756 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 GOLGA8HP0CJ92 632 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 RXRAP19793 462 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 COPB2P35606 906 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
CCDC47-203ENST00000580986 FAM110CQ1W6H9 321 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 TTBK2Q6IQ55 1244 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC47-203ENST00000580986 NBPF11Q86T75 865 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 HSCBQ8IWL3 235 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 ADGRF4Q8IZF3 695 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 SRBD1Q8N5C6 995 aaKnown RBP12.06□□□□□ -0.48
CCDC47-203ENST00000580986 REPS2Q8NFH8 660 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 SMCR8Q8TEV9 937 aaPredicted RBP12.06□□□□□ -0.48
CCDC47-203ENST00000580986 INTS4Q96HW7 963 aaKnown RBP12.06□□□□□ -0.48
CCDC47-203ENST00000580986 ZIC5Q96T25 663 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 JMJD4Q9H9V9 463 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 ZFYVE28Q9HCC9 887 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 NAP1L2Q9ULW6 460 aaPredicted RBP12.06□□□□□ -0.48
CCDC47-203ENST00000580986 MTMR7Q9Y216 660 aa12.06□□□□□ -0.48
CCDC47-203ENST00000580986 ZBTB5O15062 677 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 PRPF3O43395 683 aaKnown RBP12.05□□□□□ -0.48
CCDC47-203ENST00000580986 ZBED4O75132 1171 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
CCDC47-203ENST00000580986 ST3GAL1Q11201 340 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 IKQ13123 557 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-203ENST00000580986 TAF1CQ15572 869 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-203ENST00000580986 SLC35G1Q2M3R5 365 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 CCDC144CPQ8IYA2 1237 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 TRIM22Q8IYM9 498 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 JMYQ8N9B5 988 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 RGS22Q8NE09 1264 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 ATG4CQ96DT6 458 aa12.05□□□□□ -0.48
CCDC47-203ENST00000580986 RRP36Q96EU6 259 aaKnown RBP12.05□□□□□ -0.48
CCDC47-203ENST00000580986 P2RX7Q99572 595 aaKnown RBP12.05□□□□□ -0.48
CCDC47-203ENST00000580986 ZNF214Q9UL59 606 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-203ENST00000580986 MYH6P13533 1939 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 PCNTO95613 3336 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 PNMA6FA0A0J9YX94 578 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 FMNL1O95466 1100 aaPredicted RBP12.04□□□□□ -0.48
CCDC47-203ENST00000580986 ICAM1P05362 532 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 BCRP11274 1271 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 SLC16A2P36021 539 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 CCT2P78371 535 aaKnown RBP12.04□□□□□ -0.48
CCDC47-203ENST00000580986 STK3Q13188 491 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 GRM1Q13255 1194 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 TKFCQ3LXA3 575 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 C17orf99Q6UX52 265 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 NSUN7Q8NE18 718 aaKnown RBP12.04□□□□□ -0.48
CCDC47-203ENST00000580986 SHCBP1Q8NEM2 672 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 LARP6Q9BRS8 491 aaKnown RBP12.04□□□□□ -0.48
CCDC47-203ENST00000580986 TEX13BQ9BXU2 312 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 UBA5Q9GZZ9 404 aa12.04□□□□□ -0.48
CCDC47-203ENST00000580986 NCOA5Q9HCD5 579 aaKnown RBP12.04□□□□□ -0.48
CCDC47-203ENST00000580986 SEC63Q9UGP8 760 aaKnown RBP12.04□□□□□ -0.48
CCDC47-203ENST00000580986 ISY1Q9ULR0 285 aaKnown RBP12.04□□□□□ -0.48
CCDC47-203ENST00000580986 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.04□□□□□ -0.48
CCDC47-203ENST00000580986 ZNF536O15090 1300 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms