RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 ZNFX1Q9P2E3 1918 aaKnown RBP17.96■□□□□ 0.47
IFT20-206ENST00000578122 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 PALM3A6NDB9 673 aaPredicted RBP17.95■□□□□ 0.46
IFT20-206ENST00000578122 ERCC3P19447 782 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 COPB2P35606 906 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 OAZ1P54368 228 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 SNRNP48Q6IEG0 339 aaKnown RBP17.95■□□□□ 0.46
IFT20-206ENST00000578122 FBXO46Q6PJ61 603 aaPredicted RBP17.95■□□□□ 0.46
IFT20-206ENST00000578122 RUFY3Q7L099 469 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 NCAPG2Q86XI2 1143 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 STAG2Q8N3U4 1231 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 MAP3K14Q99558 947 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 MYL10Q9BUA6 226 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 RANBP17Q9H2T7 1088 aaKnown RBP17.95■□□□□ 0.46
IFT20-206ENST00000578122 CPVLQ9H3G5 476 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 MROH8Q9H579 483 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 MAD2L2Q9UI95 211 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 GABRQQ9UN88 632 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 PTPN22Q9Y2R2 807 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 SLC12A7Q9Y666 1083 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
IFT20-206ENST00000578122 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
IFT20-206ENST00000578122 BAZ2BQ9UIF8 2168 aaKnown RBP17.94■□□□□ 0.46
IFT20-206ENST00000578122 KLRF2D3W0D1 207 aa17.94■□□□□ 0.46
IFT20-206ENST00000578122 SLC4A3P48751 1232 aa17.94■□□□□ 0.46
IFT20-206ENST00000578122 PRKCZQ05513 592 aa17.94■□□□□ 0.46
IFT20-206ENST00000578122 CCDC174Q6PII3 467 aa17.94■□□□□ 0.46
IFT20-206ENST00000578122 SYNE3Q6ZMZ3 975 aa17.94■□□□□ 0.46
IFT20-206ENST00000578122 Q6ZUG5 572 aa17.94■□□□□ 0.46
IFT20-206ENST00000578122 GJD2Q9UKL4 321 aa17.94■□□□□ 0.46
IFT20-206ENST00000578122 SLC15A5A6NIM6 579 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 CALM1P0DP23 149 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 CALM2P0DP24 149 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 CALM3P0DP25 149 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 FLT3LGP49771 235 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 ADGRF4Q8IZF3 695 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 TNS4Q8IZW8 715 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 CTCFLQ8NI51 663 aaPredicted RBP17.93■□□□□ 0.46
IFT20-206ENST00000578122 UPF3BQ9BZI7 483 aaKnown RBP17.93■□□□□ 0.46
IFT20-206ENST00000578122 TSPYL2Q9H2G4 693 aaPredicted RBP17.93■□□□□ 0.46
IFT20-206ENST00000578122 BRPF3Q9ULD4 1205 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 PTCH2Q9Y6C5 1203 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 IVNS1ABPQ9Y6Y0 642 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 ZNF536O15090 1300 aa17.93■□□□□ 0.46
IFT20-206ENST00000578122 DHX16O60231 1041 aaKnown RBP17.92■□□□□ 0.46
IFT20-206ENST00000578122 PTPREP23469 700 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 KIF5BP33176 963 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 MORN1Q5T089 497 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 RAB11FIP4Q86YS3 637 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 FBXL16Q8N461 479 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 RAET1EQ8TD07 263 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 SOCS4Q8WXH5 440 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 AGBL1Q96MI9 1066 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 NUDT12Q9BQG2 462 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 RIPK3Q9Y572 518 aa17.92■□□□□ 0.46
IFT20-206ENST00000578122 KLF18A0A0U1RQI7 1052 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 STRNO43815 780 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 ICAM1P05362 532 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 RXRAP19793 462 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 APOBRQ0VD83 1088 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 TKFCQ3LXA3 575 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 MICU3Q86XE3 530 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 BRF1Q92994 677 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 AGXT2Q9BYV1 514 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 JMJD4Q9H9V9 463 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 PDRG1Q9NUG6 133 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 CCPG1Q9ULG6 757 aa17.91■□□□□ 0.46
IFT20-206ENST00000578122 NAP1L2Q9ULW6 460 aaPredicted RBP17.91■□□□□ 0.46
IFT20-206ENST00000578122 ZBTB43O43298 467 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 FCER1AP12319 257 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 ALAS1P13196 640 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 GNAQP50148 359 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 MAP2K5Q13163 448 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 IRF5Q13568 498 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 GRB14Q14449 540 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 CDC37Q16543 378 aaPredicted RBP17.9■□□□□ 0.46
IFT20-206ENST00000578122 FANCBQ8NB91 859 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 CHST13Q8NET6 341 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 USP6NLQ92738 828 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 MMP19Q99542 508 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 LZTS2Q9BRK4 669 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 PNMA2Q9UL42 364 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 ZNF236Q9UL36 1845 aa17.9■□□□□ 0.46
IFT20-206ENST00000578122 ADCY3O60266 1144 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 CYP2B6P20813 491 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 RGS2P41220 211 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 SLC35G1Q2M3R5 365 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 NBPF11Q86T75 865 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 ABRAQ8N0Z2 381 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 TRERF1Q96PN7 1200 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 C22orf23Q9BZE7 217 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 RIOX1Q9H6W3 641 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
IFT20-206ENST00000578122 HOMER2Q9NSB8 354 aa17.89■□□□□ 0.45
IFT20-206ENST00000578122 RNF146Q9NTX7 359 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms