RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 HIP1O00291 1037 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 CXCL11O14625 94 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 PEX10O60683 326 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 CYP2C8P10632 490 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 BACE1P56817 501 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 SH3BP2P78314 561 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 GADL1Q6ZQY3 521 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 ESYT1Q9BSJ8 1104 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 NACAP1Q9BZK3 213 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 NEDD4P46934 1319 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 ZSWIM8A7E2V4 1837 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 PDHXO00330 501 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 NMT2O60551 498 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 FGRP09769 529 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 INHBEP58166 350 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 TMEM179Q6ZVK1 233 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 RASGRP2Q7LDG7 609 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 SH3RF1Q7Z6J0 888 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 ANKRD23Q86SG2 305 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 AMOTL1Q8IY63 956 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 FOXJ1Q92949 421 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 CFHR5Q9BXR6 569 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 LSG1Q9H089 658 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 IL17RBQ9NRM6 502 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 MYH8P13535 1937 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 RAD50Q92878 1312 aa11.24□□□□□ -0.61
NPLOC4-219ENST00000576713 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
NPLOC4-219ENST00000576713 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-219ENST00000576713 EEF2P13639 858 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-219ENST00000576713 ARHGAP9Q9BRR9 750 aa11.23□□□□□ -0.61
NPLOC4-219ENST00000576713 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
NPLOC4-219ENST00000576713 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
NPLOC4-219ENST00000576713 ORC4O43929 436 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 CYP21A2P08686 494 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 CTGFP29279 349 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 SLC19A1P41440 591 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 MFAP1P55081 439 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 WNT7BP56706 349 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 SKOR1P84550 965 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 TFAP4Q01664 338 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 ICA1Q05084 483 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 TAF1CQ15572 869 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 STOX1Q6ZVD7 989 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 BPHLQ86WA6 291 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 ZNF296Q8WUU4 475 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 PLIN4Q96Q06 1357 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 KIAA1683Q9H0B3 1180 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 AS3MTQ9HBK9 375 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
NPLOC4-219ENST00000576713 GPR25O00155 361 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 CDC45O75419 566 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 VCAM1P19320 739 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 AKNAD1Q5T1N1 836 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 SPICE1Q8N0Z3 855 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 NEDD1Q8NHV4 660 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 ADAM32Q8TC27 787 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 ADAMTS19Q8TE59 1207 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 STAG1Q8WVM7 1258 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 MAP4K1Q92918 833 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 C12orf42Q96LP6 360 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 ARHGAP39Q9C0H5 1083 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 ALG2Q9H553 416 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 CPA4Q9UI42 421 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 TMX2Q9Y320 296 aa11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 RBM8AQ9Y5S9 174 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-219ENST00000576713 ZNF213O14771 459 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 RANBP6O60518 1105 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 SOX11P35716 441 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 NOVP48745 357 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 ATP2B2Q01814 1243 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 PDE4BQ07343 736 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 AGERQ15109 404 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 RRP12Q5JTH9 1297 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 C17orf99Q6UX52 265 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 FASTKD5Q7L8L6 764 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 ZBTB33Q86T24 672 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 LRRC47Q8N1G4 583 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 RUFY2Q8WXA3 655 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 CHMP4CQ96CF2 233 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 ABHD8Q96I13 439 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 NUP88Q99567 741 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 FEZ1Q99689 392 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 ZKSCAN3Q9BRR0 538 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 KANSL2Q9H9L4 492 aa11.2□□□□□ -0.62
NPLOC4-219ENST00000576713 RLFQ13129 1914 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 B4E1Z4 1266 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 C19orf81C9J6K1 198 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 TLR2O60603 784 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms