RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ACAD9Q9H845 621 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 IL17RBQ9NRM6 502 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 NRBP1Q9UHY1 535 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 ATP11BQ9Y2G3 1177 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 SYNGAP1Q96PV0 1343 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 ALAS1P13196 640 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 TAL1P17542 331 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 RTP1P59025 263 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 SNAP25P60880 206 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 LRRC41Q15345 812 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 AKNAD1Q5T1N1 836 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 RCSD1Q6JBY9 416 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 RNF180Q86T96 592 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 DCAF4Q8WV16 495 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 LENG1Q96BZ8 264 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 UBE2OQ9C0C9 1292 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 RNF41Q9H4P4 317 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 RNF146Q9NTX7 359 aa11.38□□□□□ -0.59
NPLOC4-216ENST00000574344 FRMPD2Q68DX3 1309 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 SZT2Q5T011 3432 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 ZNF213O14771 459 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 PGK1P00558 417 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 ADCYAP1R1P41586 468 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 MDM2Q00987 491 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 MSL3Q8N5Y2 521 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 ESR2Q92731 530 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 AGBL1Q96MI9 1066 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 GDF15Q99988 308 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 LBHD1Q9BQE6 289 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 PRDM5Q9NQX1 630 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 CCPG1Q9ULG6 757 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 PRR12Q9ULL5 1215 aa11.37□□□□□ -0.59
NPLOC4-216ENST00000574344 NEDD4P46934 1319 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 PLA2G6O60733 806 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 FGRP09769 529 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 ZNF865P0CJ78 1059 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 BMP8BP34820 402 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 TKFCQ3LXA3 575 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 SLC39A5Q6ZMH5 540 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 ARMCX2Q7L311 632 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 TMEM47Q9BQJ4 181 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 ZKSCAN3Q9BRR0 538 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 GPCPD1Q9NPB8 672 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 FAM184BQ9ULE4 1060 aa11.36□□□□□ -0.59
NPLOC4-216ENST00000574344 ZNF536O15090 1300 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 SYNRGQ9UMZ2 1314 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 SNAI1O95863 264 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 SLC16A2P36021 539 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 CNTN2Q02246 1040 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 ACVR2BQ13705 512 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 IMMTQ16891 758 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 TRIM60Q495X7 471 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 TTBK2Q6IQ55 1244 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 MAMDC4Q6UXC1 1216 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 NSMFQ6X4W1 530 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 IQCA1Q86XH1 822 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 TDHQ8IZJ6 230 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 ABHD16BQ9H3Z7 469 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 SPC25Q9HBM1 224 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 A1CFQ9NQ94 594 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
NPLOC4-216ENST00000574344 A0A1W2PQ45 241 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 A0A1W2PQY0 241 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 ASB14A6NK59 587 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 KDM4AO75164 1064 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 ICAM1P05362 532 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 C6orf222P0C671 652 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 PDHBP11177 359 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 MUM1L1Q5H9M0 696 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 TTC22Q5TAA0 569 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 NOL8Q76FK4 1167 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 LRCH3Q96II8 777 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 DSCC1Q9BVC3 393 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 PHF24Q9UPV7 400 aa11.34□□□□□ -0.59
NPLOC4-216ENST00000574344 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 B4E1Z4 1266 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 SOX1O00570 391 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 ADAMTS4O75173 837 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 DUSP11O75319 330 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 PDE4AP27815 886 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 NOVP48745 357 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 CCDC178Q5BJE1 867 aa11.33□□□□□ -0.6
NPLOC4-216ENST00000574344 FAM133AQ8N9E0 248 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms