RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 DHX37Q8IY37 1157 aaKnown RBP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 ORAI2Q96SN7 254 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 KIF2CQ99661 725 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 ZC3H12CQ9C0D7 883 aaKnown RBP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 ATP13A2Q9NQ11 1180 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 CORINQ9Y5Q5 1042 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
CNOT1-222ENST00000570139 AHDC1Q5TGY3 1603 aaPredicted RBP8.97□□□□□ -0.97
CNOT1-222ENST00000570139 IRS4O14654 1257 aaPredicted RBP8.96□□□□□ -0.98
CNOT1-222ENST00000570139 U2AF1L5P0DN76 240 aaPredicted RBP8.96□□□□□ -0.98
CNOT1-222ENST00000570139 SELPP16109 830 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 ADH6P28332 368 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 CCNFP41002 786 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 U2AF1Q01081 240 aaKnown RBP eCLIP8.96□□□□□ -0.98
CNOT1-222ENST00000570139 INPP5AQ14642 412 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 WWC2Q6AWC2 1192 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 ILDR2Q71H61 639 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 CCAR1Q8IX12 1150 aaKnown RBP8.96□□□□□ -0.98
CNOT1-222ENST00000570139 SLC7A3Q8WY07 619 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 DHRS1Q96LJ7 313 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 SLC9A7Q96T83 725 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 CDC6Q99741 560 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 GEMIN8Q9NWZ8 242 aaKnown RBP8.96□□□□□ -0.98
CNOT1-222ENST00000570139 ZNF214Q9UL59 606 aaPredicted RBP8.96□□□□□ -0.98
CNOT1-222ENST00000570139 MAPK8IP3Q9UPT6 1336 aa8.96□□□□□ -0.98
CNOT1-222ENST00000570139 CAMTA1Q9Y6Y1 1673 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 PLD2O14939 933 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 PDE8AO60658 829 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 RAG1P15918 1043 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 CDKN1CP49918 316 aaPredicted RBP8.95□□□□□ -0.98
CNOT1-222ENST00000570139 C21orf62-AS1Q17RA5 79 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 GNPTABQ3T906 1256 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 FNDC3BQ53EP0 1204 aaKnown RBP8.95□□□□□ -0.98
CNOT1-222ENST00000570139 PSAPL1Q6NUJ1 521 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 BRINP3Q76B58 766 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 JAMLQ86YT9 394 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 RUSC1Q9BVN2 902 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 NCOA5Q9HCD5 579 aaKnown RBP8.95□□□□□ -0.98
CNOT1-222ENST00000570139 OSGEPQ9NPF4 335 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 KLHL3Q9UH77 587 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 MAPRE3Q9UPY8 281 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 PLEKHG2Q9H7P9 1386 aa8.95□□□□□ -0.98
CNOT1-222ENST00000570139 ROBO1Q9Y6N7 1651 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 ABCA3Q99758 1704 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 RGS9O75916 674 aaPredicted RBP8.94□□□□□ -0.98
CNOT1-222ENST00000570139 ARAFP10398 606 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 IL13P35225 146 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 AMPHP49418 695 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 NFKB2Q00653 900 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 PDE3AQ14432 1141 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 CYFIP1Q7L576 1253 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 KLHL6Q8WZ60 621 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 CCDC86Q9H6F5 360 aaKnown RBP8.94□□□□□ -0.98
CNOT1-222ENST00000570139 MYH16Q9H6N6 1097 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 PCDHB10Q9UN67 800 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 MAP3K19Q56UN5 1328 aa8.94□□□□□ -0.98
CNOT1-222ENST00000570139 COL22A1Q8NFW1 1626 aaPredicted RBP8.94□□□□□ -0.98
CNOT1-222ENST00000570139 A0A087X0B3 334 aa8.93□□□□□ -0.98
CNOT1-222ENST00000570139 PGRP06401 933 aa8.93□□□□□ -0.98
CNOT1-222ENST00000570139 CPEP16870 476 aa8.93□□□□□ -0.98
CNOT1-222ENST00000570139 RRS1Q15050 365 aaKnown RBP8.93□□□□□ -0.98
CNOT1-222ENST00000570139 BRDTQ58F21 947 aaPredicted RBP8.93□□□□□ -0.98
CNOT1-222ENST00000570139 DDX42Q86XP3 938 aaKnown RBP eCLIP8.93□□□□□ -0.98
CNOT1-222ENST00000570139 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
CNOT1-222ENST00000570139 RIPOR2Q9Y4F9 1068 aa8.93□□□□□ -0.98
CNOT1-222ENST00000570139 SPATA31A3Q5VYP0 1347 aa8.93□□□□□ -0.98
CNOT1-222ENST00000570139 ZNF521Q96K83 1311 aa8.93□□□□□ -0.98
CNOT1-222ENST00000570139 KDRP35968 1356 aa8.93□□□□□ -0.98
CNOT1-222ENST00000570139 CPDO75976 1380 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 TRAV20A0A0B4J274 112 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 PRAMEF27A3QJZ7 478 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 GPR25O00155 361 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 MAOBP27338 520 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 YARSP54577 528 aaKnown RBP8.92□□□□□ -0.98
CNOT1-222ENST00000570139 LMOD3Q0VAK6 560 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 HSP90AA2PQ14568 343 aaPredicted RBP8.92□□□□□ -0.98
CNOT1-222ENST00000570139 SV2CQ496J9 727 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 IL22RA1Q8N6P7 574 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 RELTQ969Z4 430 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 DHRS4Q9BTZ2 278 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 NRSN2Q9GZP1 204 aa8.92□□□□□ -0.98
CNOT1-222ENST00000570139 INTS7Q9NVH2 962 aaKnown RBP8.92□□□□□ -0.98
CNOT1-222ENST00000570139 IGSF1Q8N6C5 1336 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 CDC14CA4D256 554 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 ANKRD34BA5PLL1 514 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 FAM86C2PA6NEL3 165 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 TPD52L2O43399 206 aaKnown RBP8.91□□□□□ -0.98
CNOT1-222ENST00000570139 DNAJA2O60884 412 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 GCP02774 474 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 CDC25BP30305 580 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 HOXC9P31274 260 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 GRK4P32298 578 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 ETF1P62495 437 aaKnown RBP8.91□□□□□ -0.98
CNOT1-222ENST00000570139 CALD1Q05682 793 aaKnown RBP8.91□□□□□ -0.98
CNOT1-222ENST00000570139 EIF4A2Q14240 407 aaKnown RBP8.91□□□□□ -0.98
CNOT1-222ENST00000570139 KIF4BQ2VIQ3 1234 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 GORABQ5T7V8 394 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 RNF180Q86T96 592 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms