RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-209	ENST00000566749	CACNB2	Q08289	660 aa	Predicted RBP	28.84	■■■□□ 2.21
PPP4C-209	ENST00000566749	MAP3K21	Q5TCX8	1036 aa		28.84	■■■□□ 2.21
PPP4C-209	ENST00000566749	CHST13	Q8NET6	341 aa		28.84	■■■□□ 2.21
PPP4C-209	ENST00000566749	DEFB118	Q96PH6	123 aa		28.84	■■■□□ 2.21
PPP4C-209	ENST00000566749	RANBP17	Q9H2T7	1088 aa	Known RBP	28.84	■■■□□ 2.21
PPP4C-209	ENST00000566749	PAK6	Q9NQU5	681 aa	Predicted RBP	28.84	■■■□□ 2.21
PPP4C-209	ENST00000566749	U2AF1L4	Q8WU68	220 aa	Known RBP	28.83	■■■□□ 2.21
PPP4C-209	ENST00000566749	DDX11	Q96FC9	970 aa		28.83	■■■□□ 2.21
PPP4C-209	ENST00000566749	WTAP	Q15007	396 aa		28.82	■■■□□ 2.2
PPP4C-209	ENST00000566749	OLFML2B	Q68BL8	750 aa		28.82	■■■□□ 2.2
PPP4C-209	ENST00000566749	SGPL1	O95470	568 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	PARP1	P09874	1014 aa	Known RBP	28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	ALAS1	P13196	640 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	CYP2C19	P33261	490 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	ANTXR2	P58335	489 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	ASPRV1	Q53RT3	343 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	TMEM67	Q5HYA8	995 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	ANKRD35	Q8N283	1001 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	RNF146	Q9NTX7	359 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	CCPG1	Q9ULG6	757 aa		28.81	■■■□□ 2.2
PPP4C-209	ENST00000566749	ICAM1	P05362	532 aa		28.8	■■■□□ 2.2
PPP4C-209	ENST00000566749	TKFC	Q3LXA3	575 aa		28.8	■■■□□ 2.2
PPP4C-209	ENST00000566749	MAML3	Q96JK9	1138 aa		28.8	■■■□□ 2.2
PPP4C-209	ENST00000566749	UBA5	Q9GZZ9	404 aa		28.8	■■■□□ 2.2
PPP4C-209	ENST00000566749	ACAD9	Q9H845	621 aa		28.8	■■■□□ 2.2
PPP4C-209	ENST00000566749	PLXNA1	Q9UIW2	1896 aa		28.8	■■■□□ 2.2
PPP4C-209	ENST00000566749	MCM5	P33992	734 aa		28.79	■■■□□ 2.2
PPP4C-209	ENST00000566749	SHISA4	Q96DD7	197 aa		28.79	■■■□□ 2.2
PPP4C-209	ENST00000566749	TRERF1	Q96PN7	1200 aa		28.79	■■■□□ 2.2
PPP4C-209	ENST00000566749	CPVL	Q9H3G5	476 aa		28.79	■■■□□ 2.2
PPP4C-209	ENST00000566749	PRC1	O43663	620 aa		28.78	■■■□□ 2.2
PPP4C-209	ENST00000566749	TFRC	P02786	760 aa	Known RBP	28.78	■■■□□ 2.2
PPP4C-209	ENST00000566749	ZNF792	Q3KQV3	632 aa		28.78	■■■□□ 2.2
PPP4C-209	ENST00000566749	IGDCC4	Q8TDY8	1250 aa		28.78	■■■□□ 2.2
PPP4C-209	ENST00000566749	SENP2	Q9HC62	589 aa		28.78	■■■□□ 2.2
PPP4C-209	ENST00000566749	DIS3	Q9Y2L1	958 aa	Known RBP	28.78	■■■□□ 2.2
PPP4C-209	ENST00000566749	CCND3	P30281	292 aa	Predicted RBP	28.78	■■■□□ 2.2
PPP4C-209	ENST00000566749	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	28.78	■■■□□ 2.2
PPP4C-209	ENST00000566749	REC8	O95072	547 aa		28.77	■■■□□ 2.2
PPP4C-209	ENST00000566749	MTA3	Q9BTC8	594 aa		28.77	■■■□□ 2.2
PPP4C-209	ENST00000566749	MKI67	P46013	3256 aa	Known RBP	28.76	■■■□□ 2.19
PPP4C-209	ENST00000566749	DHX16	O60231	1041 aa	Known RBP	28.76	■■■□□ 2.19
PPP4C-209	ENST00000566749	IGHA2	P01877	340 aa		28.76	■■■□□ 2.19
PPP4C-209	ENST00000566749	PNMA2	Q9UL42	364 aa		28.76	■■■□□ 2.19
PPP4C-209	ENST00000566749	SMCHD1	A6NHR9	2005 aa		28.76	■■■□□ 2.19
PPP4C-209	ENST00000566749	DNAJC25-GNG10	A0A024R161	153 aa		28.75	■■■□□ 2.19
PPP4C-209	ENST00000566749	TAL1	P17542	331 aa	Predicted RBP	28.75	■■■□□ 2.19
PPP4C-209	ENST00000566749	CNGA1	P29973	690 aa		28.75	■■■□□ 2.19
PPP4C-209	ENST00000566749	CATIP	Q7Z7H3	387 aa		28.75	■■■□□ 2.19
PPP4C-209	ENST00000566749	ADGRF4	Q8IZF3	695 aa		28.75	■■■□□ 2.19
PPP4C-209	ENST00000566749	STAG2	Q8N3U4	1231 aa		28.75	■■■□□ 2.19
PPP4C-209	ENST00000566749	TMEM87B	Q96K49	555 aa		28.75	■■■□□ 2.19
PPP4C-209	ENST00000566749	CRISPLD2	Q9H0B8	497 aa		28.75	■■■□□ 2.19
PPP4C-209	ENST00000566749	CAPN2	P17655	700 aa		28.74	■■■□□ 2.19
PPP4C-209	ENST00000566749	MUM1L1	Q5H9M0	696 aa		28.74	■■■□□ 2.19
PPP4C-209	ENST00000566749	RASEF	Q8IZ41	740 aa		28.74	■■■□□ 2.19
PPP4C-209	ENST00000566749	NEK1	Q96PY6	1258 aa		28.74	■■■□□ 2.19
PPP4C-209	ENST00000566749	TINF2	Q9BSI4	451 aa		28.74	■■■□□ 2.19
PPP4C-209	ENST00000566749	LY9	Q9HBG7	655 aa		28.74	■■■□□ 2.19
PPP4C-209	ENST00000566749	A1CF	Q9NQ94	594 aa	Known RBP	28.74	■■■□□ 2.19
PPP4C-209	ENST00000566749	KLRF2	D3W0D1	207 aa		28.73	■■■□□ 2.19
PPP4C-209	ENST00000566749	COL9A3	Q14050	684 aa	Predicted RBP	28.73	■■■□□ 2.19
PPP4C-209	ENST00000566749	KRT32	Q14532	448 aa		28.73	■■■□□ 2.19
PPP4C-209	ENST00000566749	TSGA10IP	Q3SY00	556 aa		28.73	■■■□□ 2.19
PPP4C-209	ENST00000566749	VAT1L	Q9HCJ6	419 aa		28.73	■■■□□ 2.19
PPP4C-209	ENST00000566749	GPHN	Q9NQX3	736 aa	Predicted RBP	28.73	■■■□□ 2.19
PPP4C-209	ENST00000566749	MAD2L2	Q9UI95	211 aa		28.73	■■■□□ 2.19
PPP4C-209	ENST00000566749	CYBA	P13498	195 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	GRM4	Q14833	912 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	CDC37	Q16543	378 aa	Predicted RBP	28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	NFXL1	Q6ZNB6	911 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	TMTC2	Q8N394	836 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	TRPV1	Q8NER1	839 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	PFAS	O15067	1338 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	WDR19	Q8NEZ3	1342 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	PALM3	A6NDB9	673 aa	Predicted RBP	28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	POTEB2	H3BUK9	544 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	SH2B2	O14492	632 aa	Predicted RBP	28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	TROAP	Q12815	778 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	PRAMEF19	Q5SWL8	479 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	NSMF	Q6X4W1	530 aa		28.72	■■■□□ 2.19
PPP4C-209	ENST00000566749	TNRC18	O15417	2968 aa	Predicted RBP	28.71	■■■□□ 2.19
PPP4C-209	ENST00000566749	ADCK5	Q3MIX3	580 aa		28.71	■■■□□ 2.19
PPP4C-209	ENST00000566749	NUP133	Q8WUM0	1156 aa		28.71	■■■□□ 2.19
PPP4C-209	ENST00000566749	LRRC2	Q9BYS8	371 aa		28.71	■■■□□ 2.19
PPP4C-209	ENST00000566749	CCDC69	A6NI79	296 aa		28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	FARP2	O94887	1054 aa	Predicted RBP	28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	HSPA4	P34932	840 aa		28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	CNTN2	Q02246	1040 aa		28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	USH1G	Q495M9	461 aa		28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	ZNF467	Q7Z7K2	595 aa	Predicted RBP	28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	ZNF654	Q8IZM8	581 aa		28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	MSL3	Q8N5Y2	521 aa	Known RBP	28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	JMJD4	Q9H9V9	463 aa		28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	DDX20	Q9UHI6	824 aa	Known RBP	28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	MYH6	P13533	1939 aa		28.7	■■■□□ 2.18
PPP4C-209	ENST00000566749	MSC	O60682	206 aa		28.69	■■■□□ 2.18
PPP4C-209	ENST00000566749	LHX8	Q68G74	356 aa		28.69	■■■□□ 2.18
PPP4C-209	ENST00000566749	CYP39A1	Q9NYL5	469 aa		28.69	■■■□□ 2.18
PPP4C-209	ENST00000566749	OGDHL	Q9ULD0	1010 aa		28.69	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms