RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SYNPO2Q9UMS6 1093 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 SLC4A4Q9Y6R1 1079 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 IGKV6D-41A0A0C4DH26 115 aa15.3■□□□□ 0.04
RNF40-208ENST00000565995 GRXCR1A8MXD5 290 aa15.3■□□□□ 0.04
RNF40-208ENST00000565995 C6orf222P0C671 652 aaPredicted RBP15.3■□□□□ 0.04
RNF40-208ENST00000565995 OAZ1P54368 228 aa15.3■□□□□ 0.04
RNF40-208ENST00000565995 HNRNPUQ00839 825 aaKnown RBP eCLIP15.3■□□□□ 0.04
RNF40-208ENST00000565995 CHST13Q8NET6 341 aa15.3■□□□□ 0.04
RNF40-208ENST00000565995 PUS7LQ9H0K6 701 aaKnown RBP15.3■□□□□ 0.04
RNF40-208ENST00000565995 BOLA2Q9H3K6 86 aa15.3■□□□□ 0.04
RNF40-208ENST00000565995 SPC25Q9HBM1 224 aa15.3■□□□□ 0.04
RNF40-208ENST00000565995 IL23AQ9NPF7 189 aa15.3■□□□□ 0.04
RNF40-208ENST00000565995 FBXO40Q9UH90 709 aa15.3■□□□□ 0.04
RNF40-208ENST00000565995 PTPRSQ13332 1948 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 TLR3O15455 904 aaKnown RBP15.29■□□□□ 0.04
RNF40-208ENST00000565995 ZBED4O75132 1171 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 HMMRO75330 724 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 NDUFB10O96000 172 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 CHGBP05060 677 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 IRX5P78411 483 aaPredicted RBP15.29■□□□□ 0.04
RNF40-208ENST00000565995 RAB30Q15771 203 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 GNASQ5JWF2 1037 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 ZSCAN25Q6NSZ9 544 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 PANK1Q8TE04 598 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 STRBPQ96SI9 672 aaKnown RBP15.29■□□□□ 0.04
RNF40-208ENST00000565995 NUP88Q99567 741 aaPredicted RBP15.29■□□□□ 0.04
RNF40-208ENST00000565995 PRDM12Q9H4Q4 367 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 THEGQ9P2T0 379 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
RNF40-208ENST00000565995 PRRC2BQ5JSZ5 2229 aaKnown RBP15.29■□□□□ 0.04
RNF40-208ENST00000565995 SCN10AQ9Y5Y9 1956 aa15.29■□□□□ 0.04
RNF40-208ENST00000565995 FDX1P10109 184 aa15.28■□□□□ 0.04
RNF40-208ENST00000565995 MRPS5P82675 430 aaKnown RBP15.28■□□□□ 0.04
RNF40-208ENST00000565995 ADGRE1Q14246 886 aa15.28■□□□□ 0.04
RNF40-208ENST00000565995 CCDC129Q6ZRS4 1044 aa15.28■□□□□ 0.04
RNF40-208ENST00000565995 ARMCX2Q7L311 632 aa15.28■□□□□ 0.04
RNF40-208ENST00000565995 ZBTB40Q9NUA8 1239 aa15.28■□□□□ 0.04
RNF40-208ENST00000565995 FEM1BQ9UK73 627 aa15.28■□□□□ 0.04
RNF40-208ENST00000565995 TANC1Q9C0D5 1861 aa15.28■□□□□ 0.04
RNF40-208ENST00000565995 GSG1L2A8MUP6 293 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 CABYRO75952 493 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 ACRP10323 421 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 MS4A1P11836 297 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 CCDC144CPQ8IYA2 1237 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 ANKRD35Q8N283 1001 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 FAM133AQ8N9E0 248 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 TET1Q8NFU7 2136 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 MSRAQ9UJ68 235 aa15.27■□□□□ 0.04
RNF40-208ENST00000565995 GNEQ9Y223 722 aaKnown RBP15.27■□□□□ 0.04
RNF40-208ENST00000565995 ASTN1O14525 1302 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 RAD21O60216 631 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 FGBP02675 491 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 CYP2C18P33260 490 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 CPXCR1Q8N123 301 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 VTI1AQ96AJ9 217 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 MKNK2Q9HBH9 465 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 RAVER2Q9HCJ3 691 aaKnown RBP15.26■□□□□ 0.03
RNF40-208ENST00000565995 MTMR4Q9NYA4 1195 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 CXXC1Q9P0U4 656 aaPredicted RBP15.26■□□□□ 0.03
RNF40-208ENST00000565995 CLIP2Q9UDT6 1046 aa15.26■□□□□ 0.03
RNF40-208ENST00000565995 PLIN4Q96Q06 1357 aa15.25■□□□□ 0.03
RNF40-208ENST00000565995 GRIN2DO15399 1336 aa15.25■□□□□ 0.03
RNF40-208ENST00000565995 APBB1O00213 710 aa15.25■□□□□ 0.03
RNF40-208ENST00000565995 POU3F3P20264 500 aaPredicted RBP15.25■□□□□ 0.03
RNF40-208ENST00000565995 TNFAIP2Q03169 654 aa15.25■□□□□ 0.03
RNF40-208ENST00000565995 ADAMTS19Q8TE59 1207 aa15.25■□□□□ 0.03
RNF40-208ENST00000565995 PPP1R12CQ9BZL4 782 aa15.25■□□□□ 0.03
RNF40-208ENST00000565995 MTIF3Q9H2K0 278 aaKnown RBP15.25■□□□□ 0.03
RNF40-208ENST00000565995 Q9Y3F1 56 aa15.25■□□□□ 0.03
RNF40-208ENST00000565995 KIAA1217Q5T5P2 1943 aa15.25■□□□□ 0.03
RNF40-208ENST00000565995 PLA2G6O60733 806 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 CNTN2Q02246 1040 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 ITGA7Q13683 1181 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 PPM1EQ8WY54 764 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 KIFC2Q96AC6 838 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 VWCEQ96DN2 955 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 SLC28A3Q9HAS3 691 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 ZNF287Q9HBT7 754 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 DDX19BQ9UMR2 479 aa15.24■□□□□ 0.03
RNF40-208ENST00000565995 YBX2Q9Y2T7 364 aaKnown RBP15.24■□□□□ 0.03
RNF40-208ENST00000565995 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 MYH6P13533 1939 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 ZNF536O15090 1300 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.23■□□□□ 0.03
RNF40-208ENST00000565995 SOWAHBA6NEL2 793 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 ASB14A6NK59 587 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 TTLL1O95922 423 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 BMP1P13497 986 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 BEX3Q00994 111 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 IQSEC1Q6DN90 963 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 RPUSD2Q8IZ73 545 aaKnown RBP15.23■□□□□ 0.03
RNF40-208ENST00000565995 CEP95Q96GE4 821 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 UHRF1Q96T88 793 aaPredicted RBP15.23■□□□□ 0.03
RNF40-208ENST00000565995 NOC4LQ9BVI4 516 aaKnown RBP15.23■□□□□ 0.03
RNF40-208ENST00000565995 NKX2-4Q9H2Z4 354 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 HIPK3Q9H422 1215 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 ACAD9Q9H845 621 aa15.23■□□□□ 0.03
RNF40-208ENST00000565995 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
RNF40-208ENST00000565995 PCDHA11Q9Y5I1 949 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms