RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 TTLL4Q14679 1199 aa6.93□□□□□ -1.3
CCNDBP1-207ENST00000565958 C2CD4AQ8NCU7 369 aaPredicted RBP6.93□□□□□ -1.3
CCNDBP1-207ENST00000565958 LRRN4CLQ8ND94 238 aa6.93□□□□□ -1.3
CCNDBP1-207ENST00000565958 FAM168AQ92567 244 aa6.93□□□□□ -1.3
CCNDBP1-207ENST00000565958 FGD4Q96M96 766 aa6.93□□□□□ -1.3
CCNDBP1-207ENST00000565958 CLUHP3Q96NS8 147 aa6.93□□□□□ -1.3
CCNDBP1-207ENST00000565958 MKRN2Q9H000 416 aaKnown RBP6.93□□□□□ -1.3
CCNDBP1-207ENST00000565958 INTS7Q9NVH2 962 aaKnown RBP6.93□□□□□ -1.3
CCNDBP1-207ENST00000565958 DNAJC25-GNG10A0A024R161 153 aa6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 EVA1CP58658 441 aa6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 SOX4Q06945 474 aaPredicted RBP6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 DCAF15Q66K64 600 aa6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 UBE3DQ7Z6J8 389 aa6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 DDX42Q86XP3 938 aaKnown RBP eCLIP6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 ISL2Q96A47 359 aa6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 ZNF512BQ96KM6 892 aaPredicted RBP6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 TARS2Q9BW92 718 aaKnown RBP6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 PIDD1Q9HB75 910 aa6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 SFMBT1Q9UHJ3 866 aa6.92□□□□□ -1.3
CCNDBP1-207ENST00000565958 ALG1L2C9J202 215 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 PRODHO43272 600 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 PPM1BO75688 479 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 ZNF865P0CJ78 1059 aaPredicted RBP6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 PABPC1P11940 636 aaKnown RBP6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 PMLP29590 882 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 MAP7Q14244 749 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 BRDTQ58F21 947 aaPredicted RBP6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 NSMFQ6X4W1 530 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 ADAT2Q7Z6V5 191 aaKnown RBP6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 LRRTM3Q86VH5 581 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 UBR7Q8N806 425 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 ZNF513Q8N8E2 541 aaPredicted RBP6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 BVESQ8NE79 360 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 BHLHE22Q8NFJ8 381 aaPredicted RBP6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 FOXQ1Q9C009 403 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 WHRNQ9P202 907 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 FAN1Q9Y2M0 1017 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 SUGT1Q9Y2Z0 365 aa6.91□□□□□ -1.3
CCNDBP1-207ENST00000565958 NOP56O00567 594 aaKnown RBP6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 RNF4P78317 190 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 WWC2Q6AWC2 1192 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 CNNM4Q6P4Q7 775 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 ZNF574Q6ZN55 896 aaPredicted RBP6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 ZNF765Q7L2R6 523 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 ARMCX6Q7L4S7 300 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 DYMQ7RTS9 669 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 SPRED2Q7Z698 418 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 PPM1KQ8N3J5 372 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 AFAP1L2Q8N4X5 818 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 CRACR2BQ8N4Y2 399 aaPredicted RBP6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 XAGE3Q8WTP9 111 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 MISP3Q96FF7 219 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 FAM84AQ96KN4 292 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 LGR4Q9BXB1 951 aa6.9□□□□□ -1.3
CCNDBP1-207ENST00000565958 TBX1O43435 398 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 RNGTTO60942 597 aaKnown RBP6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 LRIG2O94898 1065 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 CAPNS1P04632 268 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 SDSP20132 328 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 GRIA2P42262 883 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 TRIM61Q5EBN2 209 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 NBPF12Q5TAG4 269 aaPredicted RBP6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 POMZP3Q6PJE2 187 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 FMNL3Q8IVF7 1028 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 C7orf61Q8IZ16 206 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 ATL2Q8NHH9 583 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 GSX1Q9H4S2 264 aaPredicted RBP6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 SSU72Q9NP77 194 aaKnown RBP6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 THRAP3Q9Y2W1 955 aaKnown RBP6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 ZNF451Q9Y4E5 1061 aa6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 ARID4BQ4LE39 1312 aaPredicted RBP6.89□□□□□ -1.31
CCNDBP1-207ENST00000565958 SHOXO15266 292 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 ITGA4P13612 1032 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 CPEP16870 476 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 CD247P20963 164 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 FAM50AQ14320 339 aaKnown RBP6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 LILRA6Q6PI73 481 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 TRIM59Q8IWR1 403 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 SMYD4Q8IYR2 804 aaPredicted RBP6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 MFSD2AQ8NA29 543 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 RIN3Q8TB24 985 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 MRGPRX3Q96LB0 322 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 RC3H2Q9HBD1 1191 aaKnown RBP6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 NDOR1Q9UHB4 597 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 TCEAL9Q9UHQ7 104 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 AKT3Q9Y243 479 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 EMC9Q9Y3B6 208 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 ACTL7BQ9Y614 415 aa6.88□□□□□ -1.31
CCNDBP1-207ENST00000565958 NCANO14594 1321 aa6.87□□□□□ -1.31
CCNDBP1-207ENST00000565958 PRRG2O14669 202 aa6.87□□□□□ -1.31
CCNDBP1-207ENST00000565958 DNAJC8O75937 253 aaPredicted RBP6.87□□□□□ -1.31
CCNDBP1-207ENST00000565958 NFICP08651 508 aa6.87□□□□□ -1.31
CCNDBP1-207ENST00000565958 C6orf222P0C671 652 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms