RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
SPG7-207ENST00000563218 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.87■□□□□ 0.13
SPG7-207ENST00000563218 PLIN4Q96Q06 1357 aa15.87■□□□□ 0.13
SPG7-207ENST00000563218 TDO2P48775 406 aa15.86■□□□□ 0.13
SPG7-207ENST00000563218 FPGSQ05932 587 aa15.86■□□□□ 0.13
SPG7-207ENST00000563218 ACVR2BQ13705 512 aa15.86■□□□□ 0.13
SPG7-207ENST00000563218 ANKRD33Q7Z3H0 272 aa15.86■□□□□ 0.13
SPG7-207ENST00000563218 PRPF38AQ8NAV1 312 aaKnown RBP15.86■□□□□ 0.13
SPG7-207ENST00000563218 OTUD7AQ8TE49 926 aaPredicted RBP15.86■□□□□ 0.13
SPG7-207ENST00000563218 KATNBL1Q9H079 304 aa15.86■□□□□ 0.13
SPG7-207ENST00000563218 HOMER2Q9NSB8 354 aa15.86■□□□□ 0.13
SPG7-207ENST00000563218 FAM184BQ9ULE4 1060 aa15.86■□□□□ 0.13
SPG7-207ENST00000563218 CHD7Q9P2D1 2997 aa15.86■□□□□ 0.13
SPG7-207ENST00000563218 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.85■□□□□ 0.13
SPG7-207ENST00000563218 ATP2A1O14983 1001 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 CTAGE5O15320 804 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 ASGR1P07306 291 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 C6orf222P0C671 652 aaPredicted RBP15.85■□□□□ 0.13
SPG7-207ENST00000563218 FOSL2P15408 326 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 CNTN2Q02246 1040 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 CCDC144BQ3MJ40 725 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 GIMAP6Q6P9H5 292 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 ARMCX2Q7L311 632 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 MSL3Q8N5Y2 521 aaKnown RBP15.85■□□□□ 0.13
SPG7-207ENST00000563218 USP38Q8NB14 1042 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.85■□□□□ 0.131e-14■■□□□ 13.1
SPG7-207ENST00000563218 TSEN34Q9BSV6 310 aaKnown RBP15.85■□□□□ 0.13
SPG7-207ENST00000563218 TSHZ2Q9NRE2 1034 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 MTMR4Q9NYA4 1195 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 TBX21Q9UL17 535 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 MYH6P13533 1939 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 PTPRSQ13332 1948 aa15.85■□□□□ 0.13
SPG7-207ENST00000563218 MOXD2PA6NHM9 499 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 ZBED4O75132 1171 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 DUSP11O75319 330 aaKnown RBP15.84■□□□□ 0.13
SPG7-207ENST00000563218 MX1P20591 662 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 PDE1AP54750 535 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 GRIN2CQ14957 1233 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 BMP2KLQ5H9B9 411 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.84■□□□□ 0.13
SPG7-207ENST00000563218 CCDC144CPQ8IYA2 1237 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 IFNL3Q8IZI9 196 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 ANKRD35Q8N283 1001 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 UPF3AQ9H1J1 476 aaKnown RBP15.84■□□□□ 0.13
SPG7-207ENST00000563218 OSBPL3Q9H4L5 887 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 ASTN1O14525 1302 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 ZNF536O15090 1300 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 SALL3Q9BXA9 1300 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 TANC1Q9C0D5 1861 aa15.84■□□□□ 0.13
SPG7-207ENST00000563218 GRXCR1A8MXD5 290 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 TIMP1P01033 207 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 APPP05067 770 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 DNAJB2P25686 324 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 CST5P28325 142 aaPredicted RBP15.83■□□□□ 0.12
SPG7-207ENST00000563218 PBX2P40425 430 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 CDK7P50613 346 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 SNAP25P60880 206 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 BEX3Q00994 111 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 TTC22Q5TAA0 569 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 SLFN13Q68D06 897 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 C16orf59Q7L2K0 433 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 ZNF467Q7Z7K2 595 aaPredicted RBP15.83■□□□□ 0.12
SPG7-207ENST00000563218 GMCL1P1Q8NEA9 526 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 NUP133Q8WUM0 1156 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 MKL1Q969V6 931 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 GPATCH3Q96I76 525 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 TOX2Q96NM4 488 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 BACH2Q9BYV9 841 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 FEM1BQ9UK73 627 aa15.83■□□□□ 0.12
SPG7-207ENST00000563218 DCDC2CA8MYV0 355 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 TMEM232C9JQI7 657 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 FOXP2O15409 715 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 TTLL1O95922 423 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 ACRP10323 421 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 BMP3P12645 472 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 GJA9P57773 515 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 C8orf34Q49A92 452 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 TMEM63BQ5T3F8 832 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 ZNF444Q8N0Y2 327 aaPredicted RBP15.82■□□□□ 0.12
SPG7-207ENST00000563218 PI4K2BQ8TCG2 481 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 AGBL1Q96MI9 1066 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 PPP1R12CQ9BZL4 782 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
SPG7-207ENST00000563218 CTDP1Q9Y5B0 961 aaPredicted RBP15.82■□□□□ 0.12
SPG7-207ENST00000563218 LAMA4Q16363 1823 aa15.82■□□□□ 0.12
SPG7-207ENST00000563218 TCF20Q9UGU0 1960 aaKnown RBP15.82■□□□□ 0.12
SPG7-207ENST00000563218 SOWAHBA6NEL2 793 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 PATL2C9JE40 543 aaKnown RBP15.81■□□□□ 0.12
SPG7-207ENST00000563218 NMT2O60551 498 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 ELP1O95163 1332 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 TSPY3P0CV98 308 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 TSPY8P0CW00 308 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 COL9A1P20849 921 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 TRIP12Q14669 1992 aaPredicted RBP15.81■□□□□ 0.12
SPG7-207ENST00000563218 UMODL1Q5DID0 1318 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 TMEM240Q5SV17 173 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 CCDC129Q6ZRS4 1044 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 FAM126BQ8IXS8 530 aa15.81■□□□□ 0.12
SPG7-207ENST00000563218 FAM133AQ8N9E0 248 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms