RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 LRRC47Q8N1G4 583 aaKnown RBP16.31■□□□□ 0.2
SPG7-203ENST00000561702 DPF2Q92785 391 aa16.31■□□□□ 0.2
SPG7-203ENST00000561702 SMARCE1Q969G3 411 aa16.31■□□□□ 0.2
SPG7-203ENST00000561702 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
SPG7-203ENST00000561702 CABP5Q9NP86 173 aa16.31■□□□□ 0.2
SPG7-203ENST00000561702 PCDHB6Q9Y5E3 794 aa16.31■□□□□ 0.2
SPG7-203ENST00000561702 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
SPG7-203ENST00000561702 SARSP49591 514 aaKnown RBP16.31■□□□□ 0.2
SPG7-203ENST00000561702 GNAQP50148 359 aa16.31■□□□□ 0.2
SPG7-203ENST00000561702 ARID5BQ14865 1188 aa16.31■□□□□ 0.2
SPG7-203ENST00000561702 PYM1Q9BRP8 204 aaKnown RBP16.31■□□□□ 0.2
SPG7-203ENST00000561702 GOLGA8HP0CJ92 632 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 TRAPPC10P48553 1259 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 RRP1BQ14684 758 aaKnown RBP16.3■□□□□ 0.2
SPG7-203ENST00000561702 RBM26Q5T8P6 1007 aaKnown RBP16.3■□□□□ 0.2
SPG7-203ENST00000561702 USP17L2Q6R6M4 530 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 FAM83AQ86UY5 434 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 TMEM39BQ9GZU3 492 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 HSD3B7Q9H2F3 369 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 VPS54Q9P1Q0 977 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 PGAP2Q9UHJ9 254 aa16.3■□□□□ 0.2
SPG7-203ENST00000561702 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
SPG7-203ENST00000561702 USP17L5A8MUK1 530 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 CYTH3O43739 400 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 GDF11O95390 407 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
SPG7-203ENST00000561702 LMNB1P20700 586 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 KIF18AQ8NI77 898 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 SPATA20Q8TB22 786 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 ENOX1Q8TC92 643 aaKnown RBP16.29■□□□□ 0.2
SPG7-203ENST00000561702 UBE2Q2Q8WVN8 375 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 HERC5Q9UII4 1024 aaKnown RBP16.29■□□□□ 0.2
SPG7-203ENST00000561702 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 PDHBP11177 359 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 SCG2P13521 617 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 VEGFAP15692 232 aaPredicted RBP16.29■□□□□ 0.2
SPG7-203ENST00000561702 ERCC5P28715 1186 aaPredicted RBP16.29■□□□□ 0.2
SPG7-203ENST00000561702 JAG1P78504 1218 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 MORC3Q14149 939 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 PFKFB3Q16875 520 aaPredicted RBP16.29■□□□□ 0.2
SPG7-203ENST00000561702 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 ARMCX5Q6P1M9 558 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 SAMD7Q7Z3H4 446 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 OXER1Q8TDS5 423 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 ANKRD7Q92527 254 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.2
SPG7-203ENST00000561702 MAN1B1Q9UKM7 699 aa16.29■□□□□ 0.2
SPG7-203ENST00000561702 ACTN4O43707 911 aaKnown RBP16.28■□□□□ 0.2
SPG7-203ENST00000561702 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 SEPT2Q15019 361 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 ABCB5Q2M3G0 1257 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 ZNF710Q8N1W2 664 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 LZTS2Q9BRK4 669 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 CPVLQ9H3G5 476 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 SERTAD1Q9UHV2 236 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 TBC1D10BQ4KMP7 808 aaPredicted RBP16.28■□□□□ 0.2
SPG7-203ENST00000561702 PPP4R3BQ5MIZ7 849 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 TMEM179Q6ZVK1 233 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 FCHSD1Q86WN1 690 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 SIAH1Q8IUQ4 282 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 VSTM4Q8IW00 320 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 CCDC94Q9BW85 323 aaPredicted RBP16.28■□□□□ 0.2
SPG7-203ENST00000561702 SPZ1Q9BXG8 430 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 CSRNP2Q9H175 543 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
SPG7-203ENST00000561702 SCAF8Q9UPN6 1271 aaKnown RBP16.28■□□□□ 0.2
SPG7-203ENST00000561702 ASTN2O75129 1339 aaPredicted RBP16.27■□□□□ 0.2
SPG7-203ENST00000561702 ATP1A3P13637 1013 aa16.27■□□□□ 0.2
SPG7-203ENST00000561702 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.2
SPG7-203ENST00000561702 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.2
SPG7-203ENST00000561702 CALML3P27482 149 aa16.27■□□□□ 0.2
SPG7-203ENST00000561702 FAM177A1Q8N128 213 aaPredicted RBP16.27■□□□□ 0.2
SPG7-203ENST00000561702 FANCLQ9NW38 375 aa16.27■□□□□ 0.2
SPG7-203ENST00000561702 NYAP2Q9P242 653 aa16.27■□□□□ 0.2
SPG7-203ENST00000561702 FRMPD2Q68DX3 1309 aaPredicted RBP16.27■□□□□ 0.19
SPG7-203ENST00000561702 SLFN14P0C7P3 912 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 NPY5RQ15761 445 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 SPECC1Q5M775 1068 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 TNFRSF25Q93038 417 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 MKL1Q969V6 931 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 SH3GLB2Q9NR46 395 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 USP27XA6NNY8 438 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 TBC1D12O60347 775 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 GH2P01242 217 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 SMARCA1P28370 1054 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 ICA1Q05084 483 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 GRIN1Q05586 938 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 ASPRV1Q53RT3 343 aa16.26■□□□□ 0.19
SPG7-203ENST00000561702 ATAD5Q96QE3 1844 aa16.25■□□□□ 0.19
SPG7-203ENST00000561702 BMP6P22004 513 aa16.25■□□□□ 0.19
SPG7-203ENST00000561702 TNNI2P48788 182 aa16.25■□□□□ 0.19
SPG7-203ENST00000561702 RASA3Q14644 834 aa16.25■□□□□ 0.19
SPG7-203ENST00000561702 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
SPG7-203ENST00000561702 E4F1Q66K89 784 aaPredicted RBP16.25■□□□□ 0.19
SPG7-203ENST00000561702 PDCL2Q8N4E4 241 aa16.25■□□□□ 0.19
SPG7-203ENST00000561702 GPKOWQ92917 476 aaPredicted RBP eCLIP16.25■□□□□ 0.19
SPG7-203ENST00000561702 GSDMAQ96QA5 445 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms