RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ABRAQ8N0Z2 381 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 STAG2Q8N3U4 1231 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 RANBP17Q9H2T7 1088 aaKnown RBP14.15□□□□□ -0.14
USP8-212ENST00000560730 HOMER2Q9NSB8 354 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 MCM3APO60318 1980 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 PRC1O43663 620 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 COPB2P35606 906 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 ADCK5Q3MIX3 580 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 TMEM67Q5HYA8 995 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 GPATCH4Q5T3I0 446 aaKnown RBP14.15□□□□□ -0.14
USP8-212ENST00000560730 MAP3K21Q5TCX8 1036 aa14.15□□□□□ -0.14
USP8-212ENST00000560730 TRMT44Q8IYL2 757 aaKnown RBP14.15□□□□□ -0.14
USP8-212ENST00000560730 GJB1P08034 283 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 ALAS1P13196 640 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 PRKAR2AP13861 404 aaKnown RBP14.14□□□□□ -0.15
USP8-212ENST00000560730 CYP2C19P33261 490 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 KCTD2Q14681 263 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 WTAPQ15007 396 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 TSGA10IPQ3SY00 556 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 RNF20Q5VTR2 975 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 SHISA4Q96DD7 197 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 LRRC2Q9BYS8 371 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 LY9Q9HBG7 655 aa14.14□□□□□ -0.15
USP8-212ENST00000560730 RPTORQ8N122 1335 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 ERICH2A1L162 156 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 PARP1P09874 1014 aaKnown RBP14.13□□□□□ -0.15
USP8-212ENST00000560730 CCND3P30281 292 aaPredicted RBP14.13□□□□□ -0.15
USP8-212ENST00000560730 MCM5P33992 734 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 SART3Q15020 963 aaKnown RBP14.13□□□□□ -0.15
USP8-212ENST00000560730 SLC35G1Q2M3R5 365 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 ZNF792Q3KQV3 632 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 ASPRV1Q53RT3 343 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP8-212ENST00000560730 ADGRF4Q8IZF3 695 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 CHST13Q8NET6 341 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 KCNB2Q92953 911 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 MAML3Q96JK9 1138 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 TRERF1Q96PN7 1200 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP8-212ENST00000560730 PAK6Q9NQU5 681 aaPredicted RBP14.13□□□□□ -0.15
USP8-212ENST00000560730 RNF146Q9NTX7 359 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 MAD2L2Q9UI95 211 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 CCPG1Q9ULG6 757 aa14.13□□□□□ -0.15
USP8-212ENST00000560730 LCTP09848 1927 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 DNAJC25-GNG10A0A024R161 153 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 SH2B2O14492 632 aaPredicted RBP14.12□□□□□ -0.15
USP8-212ENST00000560730 ICAM1P05362 532 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 GJA8P48165 433 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 TROAPQ12815 778 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 MFSD14CQ5VZR4 134 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 OLFML2BQ68BL8 750 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 TRPV1Q8NER1 839 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 U2AF1L4Q8WU68 220 aaKnown RBP14.12□□□□□ -0.15
USP8-212ENST00000560730 DDX11Q96FC9 970 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 TCEANC2Q96MN5 208 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 DEFB118Q96PH6 123 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 NEK1Q96PY6 1258 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 MYL10Q9BUA6 226 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 VAT1LQ9HCJ6 419 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 HMX1Q9NP08 348 aaPredicted RBP14.12□□□□□ -0.15
USP8-212ENST00000560730 PDE4DIPQ5VU43 2346 aa14.12□□□□□ -0.15
USP8-212ENST00000560730 PALM3A6NDB9 673 aaPredicted RBP14.11□□□□□ -0.15
USP8-212ENST00000560730 KLRF2D3W0D1 207 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 REC8O95072 547 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 SGPL1O95470 568 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 CPA1P15085 419 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 HSPA4P34932 840 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 EXOSC10Q01780 885 aaKnown RBP14.11□□□□□ -0.15
USP8-212ENST00000560730 CNTN2Q02246 1040 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 GRM4Q14833 912 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 TKFCQ3LXA3 575 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 PRAMEF19Q5SWL8 479 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 ANKRD35Q8N283 1001 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 FGD4Q96M96 766 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 ACAD9Q9H845 621 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 JMJD4Q9H9V9 463 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 SLC5A4Q9NY91 659 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 FBXO40Q9UH90 709 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 SNX14Q9Y5W7 946 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 BRCA2P51587 3418 aa14.11□□□□□ -0.15
USP8-212ENST00000560730 FRMPD3Q5JV73 1810 aa14.1□□□□□ -0.15
USP8-212ENST00000560730 CDC37Q16543 378 aaPredicted RBP14.1□□□□□ -0.15
USP8-212ENST00000560730 CATIPQ7Z7H3 387 aa14.1□□□□□ -0.15
USP8-212ENST00000560730 ZNF654Q8IZM8 581 aa14.1□□□□□ -0.15
USP8-212ENST00000560730 TMEM87BQ96K49 555 aa14.1□□□□□ -0.15
USP8-212ENST00000560730 MTA3Q9BTC8 594 aa14.1□□□□□ -0.15
USP8-212ENST00000560730 USP26Q9BXU7 913 aa14.1□□□□□ -0.15
USP8-212ENST00000560730 A1CFQ9NQ94 594 aaKnown RBP14.1□□□□□ -0.15
USP8-212ENST00000560730 DIS3Q9Y2L1 958 aaKnown RBP14.1□□□□□ -0.15
USP8-212ENST00000560730 NFIBO00712 420 aa14.09□□□□□ -0.15
USP8-212ENST00000560730 TFRCP02786 760 aaKnown RBP14.09□□□□□ -0.15
USP8-212ENST00000560730 CYBAP13498 195 aa14.09□□□□□ -0.15
USP8-212ENST00000560730 MLLT1Q03111 559 aaPredicted RBP14.09□□□□□ -0.15
USP8-212ENST00000560730 QRICH1Q2TAL8 776 aa14.09□□□□□ -0.15
USP8-212ENST00000560730 RAB11FIP4Q86YS3 637 aa14.09□□□□□ -0.15
USP8-212ENST00000560730 NUP133Q8WUM0 1156 aa14.09□□□□□ -0.15
USP8-212ENST00000560730 CLEC4DQ8WXI8 215 aa14.09□□□□□ -0.15
USP8-212ENST00000560730 PURBQ96QR8 312 aaKnown RBP14.09□□□□□ -0.15
USP8-212ENST00000560730 TINF2Q9BSI4 451 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms