RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 PPP4R3BQ5MIZ7 849 aa20.66■□□□□ 0.9
CRTC3-208ENST00000560098 FAM160B2Q86V87 743 aa20.66■□□□□ 0.9
CRTC3-208ENST00000560098 HOMER2Q9NSB8 354 aa20.66■□□□□ 0.9
CRTC3-208ENST00000560098 TMEM39AQ9NV64 488 aa20.66■□□□□ 0.9
CRTC3-208ENST00000560098 CST5P28325 142 aaPredicted RBP20.65■□□□□ 0.9
CRTC3-208ENST00000560098 SLC1A4P43007 532 aa20.65■□□□□ 0.9
CRTC3-208ENST00000560098 SMAD3P84022 425 aaKnown RBP20.65■□□□□ 0.9
CRTC3-208ENST00000560098 FAAP100Q0VG06 881 aa20.65■□□□□ 0.9
CRTC3-208ENST00000560098 ARMCX2Q7L311 632 aa20.65■□□□□ 0.9
CRTC3-208ENST00000560098 CHURC1Q8WUH1 139 aa20.65■□□□□ 0.9
CRTC3-208ENST00000560098 STAG1Q8WVM7 1258 aa20.65■□□□□ 0.9
CRTC3-208ENST00000560098 UNC80Q8N2C7 3258 aa20.65■□□□□ 0.9
CRTC3-208ENST00000560098 SALL3Q9BXA9 1300 aa20.65■□□□□ 0.9
CRTC3-208ENST00000560098 MYADML2A6NDP7 307 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 DCDC2CA8MYV0 355 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 FOXP2O15409 715 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 ADCY6O43306 1168 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 IKQ13123 557 aaPredicted RBP20.64■□□□□ 0.89
CRTC3-208ENST00000560098 CCDC144BQ3MJ40 725 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 CCDC129Q6ZRS4 1044 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 CCDC144CPQ8IYA2 1237 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 GLT1D1Q96MS3 346 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 ACAD9Q9H845 621 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 SPC25Q9HBM1 224 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 STX8Q9UNK0 236 aa20.64■□□□□ 0.89
CRTC3-208ENST00000560098 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.64■□□□□ 0.89
CRTC3-208ENST00000560098 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
CRTC3-208ENST00000560098 C6orf222P0C671 652 aaPredicted RBP20.63■□□□□ 0.89
CRTC3-208ENST00000560098 MCCP23508 829 aa20.63■□□□□ 0.89
CRTC3-208ENST00000560098 EPHB4P54760 987 aa20.63■□□□□ 0.89
CRTC3-208ENST00000560098 CNTN2Q02246 1040 aa20.63■□□□□ 0.89
CRTC3-208ENST00000560098 FPGSQ05932 587 aa20.63■□□□□ 0.89
CRTC3-208ENST00000560098 PCSK9Q8NBP7 692 aaKnown RBP20.63■□□□□ 0.89
CRTC3-208ENST00000560098 UPF3AQ9H1J1 476 aaKnown RBP20.63■□□□□ 0.89
CRTC3-208ENST00000560098 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
CRTC3-208ENST00000560098 ZNF536O15090 1300 aa20.63■□□□□ 0.89
CRTC3-208ENST00000560098 ELP1O95163 1332 aa20.63■□□□□ 0.89
CRTC3-208ENST00000560098 PLA2G6O60733 806 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 GJA9P57773 515 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 IRX5P78411 483 aaPredicted RBP20.62■□□□□ 0.89
CRTC3-208ENST00000560098 CTDSPL2Q05D32 466 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 FAM133AQ8N9E0 248 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 CHMP4CQ96CF2 233 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 RNPC3Q96LT9 517 aaKnown RBP20.62■□□□□ 0.89
CRTC3-208ENST00000560098 AGBL1Q96MI9 1066 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 KATNBL1Q9H079 304 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 SEMA6BQ9H3T3 888 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 A1CFQ9NQ94 594 aaKnown RBP20.62■□□□□ 0.89
CRTC3-208ENST00000560098 INCENPQ9NQS7 918 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 IL17RBQ9NRM6 502 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 RNF146Q9NTX7 359 aa20.62■□□□□ 0.89
CRTC3-208ENST00000560098 ASGR1P07306 291 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 TKFCQ3LXA3 575 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 ANKRD45Q5TZF3 282 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 RCSD1Q6JBY9 416 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 KCTD1Q719H9 257 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 CDX2Q99626 313 aaPredicted RBP20.61■□□□□ 0.89
CRTC3-208ENST00000560098 ANAPC4Q9UJX5 808 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 MROH7Q68CQ1 1323 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 NMT2O60551 498 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 CDK7P50613 346 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 RRP1P56182 461 aaKnown RBP20.61■□□□□ 0.89
CRTC3-208ENST00000560098 GNASQ5JWF2 1037 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 VPS53Q5VIR6 699 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 EVI5LQ96CN4 794 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 TRERF1Q96PN7 1200 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 TBX21Q9UL17 535 aa20.61■□□□□ 0.89
CRTC3-208ENST00000560098 SOWAHBA6NEL2 793 aa20.6■□□□□ 0.89
CRTC3-208ENST00000560098 RANBP6O60518 1105 aaKnown RBP20.6■□□□□ 0.89
CRTC3-208ENST00000560098 TIMP1P01033 207 aa20.6■□□□□ 0.89
CRTC3-208ENST00000560098 ALAS1P13196 640 aa20.6■□□□□ 0.89
CRTC3-208ENST00000560098 VTI1AQ96AJ9 217 aa20.6■□□□□ 0.89
CRTC3-208ENST00000560098 TTYH1Q9H313 450 aaPredicted RBP20.6■□□□□ 0.89
CRTC3-208ENST00000560098 PRR12Q9ULL5 1215 aa20.6■□□□□ 0.89
CRTC3-208ENST00000560098 ASB14A6NK59 587 aa20.59■□□□□ 0.89
CRTC3-208ENST00000560098 NKX3-2P78367 333 aa20.59■□□□□ 0.89
CRTC3-208ENST00000560098 CCDC174Q6PII3 467 aa20.59■□□□□ 0.89
CRTC3-208ENST00000560098 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.59■□□□□ 0.89
CRTC3-208ENST00000560098 HELLSQ9NRZ9 838 aa20.59■□□□□ 0.89
CRTC3-208ENST00000560098 EYSQ5T1H1 3165 aa20.58■□□□□ 0.89
CRTC3-208ENST00000560098 A0A0U1RQG5 324 aaPredicted RBP20.58■□□□□ 0.88
CRTC3-208ENST00000560098 ARVCFO00192 962 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 CTAGE5O15320 804 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 ORC4O43929 436 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 NOVP48745 357 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 SNAP25P60880 206 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 TNFAIP2Q03169 654 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 ALX1Q15699 326 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 MFSD5Q6N075 450 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 RASGRP2Q7LDG7 609 aa20.58■□□□□ 0.88
CRTC3-208ENST00000560098 CDH23Q9H251 3354 aa20.57■□□□□ 0.88
CRTC3-208ENST00000560098 TMEM265A0A087WTH1 108 aa20.57■□□□□ 0.88
CRTC3-208ENST00000560098 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.57■□□□□ 0.88
CRTC3-208ENST00000560098 FGRP09769 529 aa20.57■□□□□ 0.88
CRTC3-208ENST00000560098 PDE1AP54750 535 aa20.57■□□□□ 0.88
CRTC3-208ENST00000560098 NOL8Q76FK4 1167 aaKnown RBP20.57■□□□□ 0.88
CRTC3-208ENST00000560098 CRBNQ96SW2 442 aa20.57■□□□□ 0.88
CRTC3-208ENST00000560098 MTMR7Q9Y216 660 aa20.57■□□□□ 0.88
CRTC3-208ENST00000560098 MCM3APO60318 1980 aa20.56■□□□□ 0.88
CRTC3-208ENST00000560098 BEX3Q00994 111 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms