RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 MTMR7Q9Y216 660 aa20.69■□□□□ 0.9
SMAD3-210ENST00000559092 SYDE2Q5VT97 1194 aa20.68■□□□□ 0.9
SMAD3-210ENST00000559092 TRERF1Q96PN7 1200 aa20.68■□□□□ 0.9
SMAD3-210ENST00000559092 IL25Q9H293 177 aa20.68■□□□□ 0.9
SMAD3-210ENST00000559092 RANBP17Q9H2T7 1088 aaKnown RBP20.68■□□□□ 0.9
SMAD3-210ENST00000559092 HOMER2Q9NSB8 354 aa20.68■□□□□ 0.9
SMAD3-210ENST00000559092 RNF146Q9NTX7 359 aa20.68■□□□□ 0.9
SMAD3-210ENST00000559092 ZSWIM5Q9P217 1185 aa20.68■□□□□ 0.9
SMAD3-210ENST00000559092 ICAM1P05362 532 aa20.67■□□□□ 0.9
SMAD3-210ENST00000559092 ZNF865P0CJ78 1059 aaPredicted RBP20.67■□□□□ 0.9
SMAD3-210ENST00000559092 ZNF543Q08ER8 600 aa20.67■□□□□ 0.9
SMAD3-210ENST00000559092 GPATCH4Q5T3I0 446 aaKnown RBP20.67■□□□□ 0.9
SMAD3-210ENST00000559092 TTBK2Q6IQ55 1244 aa20.67■□□□□ 0.9
SMAD3-210ENST00000559092 CCDC174Q6PII3 467 aa20.67■□□□□ 0.9
SMAD3-210ENST00000559092 RASGRP2Q7LDG7 609 aa20.67■□□□□ 0.9
SMAD3-210ENST00000559092 ZSCAN10Q96SZ4 725 aaPredicted RBP20.67■□□□□ 0.9
SMAD3-210ENST00000559092 SENP6Q9GZR1 1112 aaPredicted RBP20.67■□□□□ 0.9
SMAD3-210ENST00000559092 MYH4Q9Y623 1939 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 B4E1Z4 1266 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 SLC34A2O95436 690 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 SNAI1O95863 264 aaPredicted RBP20.66■□□□□ 0.9
SMAD3-210ENST00000559092 RARBP10826 455 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 ALAS1P13196 640 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 AKR1A1P14550 325 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 SLC16A2P36021 539 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 ZKSCAN3Q9BRR0 538 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 GPCPD1Q9NPB8 672 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 A1CFQ9NQ94 594 aaKnown RBP20.66■□□□□ 0.9
SMAD3-210ENST00000559092 CCPG1Q9ULG6 757 aa20.66■□□□□ 0.9
SMAD3-210ENST00000559092 U3KPZ7 1027 aaPredicted RBP20.66■□□□□ 0.9
SMAD3-210ENST00000559092 FRMPD2Q68DX3 1309 aaPredicted RBP20.65■□□□□ 0.9
SMAD3-210ENST00000559092 KBTBD13C9JR72 458 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 POTEB2H3BUK9 544 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 SGSM2O43147 1006 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 TAL1P17542 331 aaPredicted RBP20.65■□□□□ 0.9
SMAD3-210ENST00000559092 CHRDL2Q6WN34 429 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 CENPQQ7L2Z9 268 aaPredicted RBP20.65■□□□□ 0.9
SMAD3-210ENST00000559092 C7orf61Q8IZ16 206 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 FAM133AQ8N9E0 248 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 PNMA1Q8ND90 353 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 KAT14Q9H8E8 782 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 FAM184BQ9ULE4 1060 aa20.65■□□□□ 0.9
SMAD3-210ENST00000559092 SNAP25P60880 206 aa20.64■□□□□ 0.89
SMAD3-210ENST00000559092 GJC2Q5T442 439 aaPredicted RBP20.64■□□□□ 0.89
SMAD3-210ENST00000559092 ANO1Q5XXA6 986 aa20.64■□□□□ 0.89
SMAD3-210ENST00000559092 ENAHQ8N8S7 591 aaPredicted RBP20.64■□□□□ 0.89
SMAD3-210ENST00000559092 FGD4Q96M96 766 aa20.64■□□□□ 0.89
SMAD3-210ENST00000559092 UBAC1Q9BSL1 405 aa20.64■□□□□ 0.89
SMAD3-210ENST00000559092 PRO3102Q9H379 93 aa20.64■□□□□ 0.89
SMAD3-210ENST00000559092 ABHD16BQ9H3Z7 469 aa20.64■□□□□ 0.89
SMAD3-210ENST00000559092 XPNPEP3Q9NQH7 507 aa20.64■□□□□ 0.89
SMAD3-210ENST00000559092 RANBP2P49792 3224 aaKnown RBP20.64■□□□□ 0.89
SMAD3-210ENST00000559092 COL11A1P12107 1806 aaPredicted RBP20.63■□□□□ 0.89
SMAD3-210ENST00000559092 PTH1RQ03431 593 aa20.63■□□□□ 0.89
SMAD3-210ENST00000559092 TRDNQ13061 729 aa20.63■□□□□ 0.89
SMAD3-210ENST00000559092 ACVR2BQ13705 512 aa20.63■□□□□ 0.89
SMAD3-210ENST00000559092 LRRC41Q15345 812 aa20.63■□□□□ 0.89
SMAD3-210ENST00000559092 LRRC26Q2I0M4 334 aa20.63■□□□□ 0.89
SMAD3-210ENST00000559092 RNF180Q86T96 592 aa20.63■□□□□ 0.89
SMAD3-210ENST00000559092 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.63■□□□□ 0.89
SMAD3-210ENST00000559092 CYP39A1Q9NYL5 469 aa20.63■□□□□ 0.89
SMAD3-210ENST00000559092 TNKSO95271 1327 aa20.62■□□□□ 0.89
SMAD3-210ENST00000559092 ASB14A6NK59 587 aa20.62■□□□□ 0.89
SMAD3-210ENST00000559092 CNTN2Q02246 1040 aa20.62■□□□□ 0.89
SMAD3-210ENST00000559092 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
SMAD3-210ENST00000559092 WDR19Q8NEZ3 1342 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 A0A1W2PPC1 479 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 SOWAHBA6NEL2 793 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 CYP21A2P08686 494 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 ASPRV1Q53RT3 343 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 MUM1L1Q5H9M0 696 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 ARMCX2Q7L311 632 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 CCDC144CPQ8IYA2 1237 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 MAP4K1Q92918 833 aa20.61■□□□□ 0.89
SMAD3-210ENST00000559092 ZHX1Q9UKY1 873 aaPredicted RBP20.61■□□□□ 0.89
SMAD3-210ENST00000559092 LOC102724159A0A0B4J2E5 919 aa20.6■□□□□ 0.89
SMAD3-210ENST00000559092 DUSP11O75319 330 aaKnown RBP20.6■□□□□ 0.89
SMAD3-210ENST00000559092 BMP8BP34820 402 aa20.6■□□□□ 0.89
SMAD3-210ENST00000559092 PWP2Q15269 919 aaKnown RBP20.6■□□□□ 0.89
SMAD3-210ENST00000559092 IFIT1BQ5T764 474 aaKnown RBP20.6■□□□□ 0.89
SMAD3-210ENST00000559092 C1orf53Q5VUE5 145 aa20.6■□□□□ 0.89
SMAD3-210ENST00000559092 TSEN34Q9BSV6 310 aaKnown RBP20.6■□□□□ 0.89
SMAD3-210ENST00000559092 MAF1Q9H063 256 aa20.6■□□□□ 0.89
SMAD3-210ENST00000559092 PHF24Q9UPV7 400 aa20.6■□□□□ 0.89
SMAD3-210ENST00000559092 PGK1P00558 417 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 MYCNP04198 464 aaPredicted RBP20.59■□□□□ 0.89
SMAD3-210ENST00000559092 ADCYAP1R1P41586 468 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 ATN1P54259 1190 aaPredicted RBP20.59■□□□□ 0.89
SMAD3-210ENST00000559092 SEC23AQ15436 765 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 CCDC144BQ3MJ40 725 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 NSMFQ6X4W1 530 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 SLC39A5Q6ZMH5 540 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 KIAA1211Q6ZU35 1233 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 GDF15Q99988 308 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 KATNBL1Q9H079 304 aa20.59■□□□□ 0.89
SMAD3-210ENST00000559092 ADD3Q9UEY8 706 aaKnown RBP20.59■□□□□ 0.89
SMAD3-210ENST00000559092 ZMYND8Q9ULU4 1186 aaPredicted RBP20.59■□□□□ 0.89
SMAD3-210ENST00000559092 ADAMTS4O75173 837 aa20.58■□□□□ 0.89
SMAD3-210ENST00000559092 PARP1P09874 1014 aaKnown RBP20.58■□□□□ 0.89
SMAD3-210ENST00000559092 GOLGA8HP0CJ92 632 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms