RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 MFSD6Q6ZSS7 791 aa20.07■□□□□ 0.8
LRRC28-210ENST00000558879 DDX11Q96FC9 970 aa20.07■□□□□ 0.8
LRRC28-210ENST00000558879 ACAD9Q9H845 621 aa20.07■□□□□ 0.8
LRRC28-210ENST00000558879 ISY1Q9ULR0 285 aaKnown RBP20.07■□□□□ 0.8
LRRC28-210ENST00000558879 ZMYND8Q9ULU4 1186 aaPredicted RBP20.07■□□□□ 0.8
LRRC28-210ENST00000558879 RAD50Q92878 1312 aa20.06■□□□□ 0.8
LRRC28-210ENST00000558879 AKR1A1P14550 325 aa20.06■□□□□ 0.8
LRRC28-210ENST00000558879 IKQ13123 557 aaPredicted RBP20.06■□□□□ 0.8
LRRC28-210ENST00000558879 LRRC41Q15345 812 aa20.06■□□□□ 0.8
LRRC28-210ENST00000558879 TKFCQ3LXA3 575 aa20.06■□□□□ 0.8
LRRC28-210ENST00000558879 GJC2Q5T442 439 aaPredicted RBP20.06■□□□□ 0.8
LRRC28-210ENST00000558879 ARRDC4Q8NCT1 418 aa20.06■□□□□ 0.8
LRRC28-210ENST00000558879 AGBL1Q96MI9 1066 aa20.06■□□□□ 0.8
LRRC28-210ENST00000558879 TTC14Q96N46 770 aa20.06■□□□□ 0.8
LRRC28-210ENST00000558879 SENP6Q9GZR1 1112 aaPredicted RBP20.06■□□□□ 0.8
LRRC28-210ENST00000558879 RANBP17Q9H2T7 1088 aaKnown RBP20.06■□□□□ 0.8
LRRC28-210ENST00000558879 A1CFQ9NQ94 594 aaKnown RBP20.06■□□□□ 0.8
LRRC28-210ENST00000558879 RNF146Q9NTX7 359 aa20.06■□□□□ 0.8
LRRC28-210ENST00000558879 ZNF213O14771 459 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 SNAI1O95863 264 aaPredicted RBP20.05■□□□□ 0.8
LRRC28-210ENST00000558879 SNHG28P0DPA3 235 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 PDHBP11177 359 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 BMP8BP34820 402 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 SNX17Q15036 470 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 CCDC96Q2M329 555 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 ANKRD35Q8N283 1001 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 CHMP4CQ96CF2 233 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 HOMER2Q9NSB8 354 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 KIAA1217Q5T5P2 1943 aa20.05■□□□□ 0.8
LRRC28-210ENST00000558879 KBTBD13C9JR72 458 aa20.04■□□□□ 0.8
LRRC28-210ENST00000558879 RARBP10826 455 aa20.04■□□□□ 0.8
LRRC28-210ENST00000558879 SYN1P17600 705 aa20.04■□□□□ 0.8
LRRC28-210ENST00000558879 SLC4A3P48751 1232 aa20.04■□□□□ 0.8
LRRC28-210ENST00000558879 FAM133AQ8N9E0 248 aa20.04■□□□□ 0.8
LRRC28-210ENST00000558879 ESR2Q92731 530 aa20.04■□□□□ 0.8
LRRC28-210ENST00000558879 CNPY2Q9Y2B0 182 aa20.04■□□□□ 0.8
LRRC28-210ENST00000558879 SZT2Q5T011 3432 aa20.04■□□□□ 0.8
LRRC28-210ENST00000558879 LAMA3Q16787 3333 aa20.03■□□□□ 0.8
LRRC28-210ENST00000558879 ADAMTS4O75173 837 aa20.03■□□□□ 0.8
LRRC28-210ENST00000558879 TTBK2Q6IQ55 1244 aa20.03■□□□□ 0.8
LRRC28-210ENST00000558879 LENG1Q96BZ8 264 aaPredicted RBP20.03■□□□□ 0.8
LRRC28-210ENST00000558879 KATNBL1Q9H079 304 aa20.03■□□□□ 0.8
LRRC28-210ENST00000558879 XPNPEP3Q9NQH7 507 aa20.03■□□□□ 0.8
LRRC28-210ENST00000558879 MTMR7Q9Y216 660 aa20.03■□□□□ 0.8
LRRC28-210ENST00000558879 ASTN1O14525 1302 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 FRMPD2Q68DX3 1309 aaPredicted RBP20.02■□□□□ 0.8
LRRC28-210ENST00000558879 ICAM1P05362 532 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 SNAP25P60880 206 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 SYDE2Q5VT97 1194 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 CCDC174Q6PII3 467 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 ARMCX2Q7L311 632 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 DGKHQ86XP1 1220 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 TRERF1Q96PN7 1200 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.02■□□□□ 0.8
LRRC28-210ENST00000558879 PHF24Q9UPV7 400 aa20.02■□□□□ 0.8
LRRC28-210ENST00000558879 SYNRGQ9UMZ2 1314 aa20.02■□□□□ 0.79
LRRC28-210ENST00000558879 ADCY6O43306 1168 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 KDM4AO75164 1064 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 ALAS1P13196 640 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 SLC16A2P36021 539 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 MAGEA10P43363 369 aaPredicted RBP20.01■□□□□ 0.79
LRRC28-210ENST00000558879 ATN1P54259 1190 aaPredicted RBP20.01■□□□□ 0.79
LRRC28-210ENST00000558879 RTP1P59025 263 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 CNTN2Q02246 1040 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 ZNF543Q08ER8 600 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 IMMTQ16891 758 aaKnown RBP20.01■□□□□ 0.79
LRRC28-210ENST00000558879 MUM1L1Q5H9M0 696 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 C1orf53Q5VUE5 145 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 ZHX1Q9UKY1 873 aaPredicted RBP20.01■□□□□ 0.79
LRRC28-210ENST00000558879 CCPG1Q9ULG6 757 aa20.01■□□□□ 0.79
LRRC28-210ENST00000558879 B4E1Z4 1266 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 PGK1P00558 417 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 SLC39A5Q6ZMH5 540 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 CCDC144CPQ8IYA2 1237 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 ANKS1AQ92625 1134 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 ZKSCAN3Q9BRR0 538 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 ABHD16BQ9H3Z7 469 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 CYP39A1Q9NYL5 469 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 PCDH10Q9P2E7 1040 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 CTNNA3Q9UI47 895 aa20■□□□□ 0.79
LRRC28-210ENST00000558879 SOWAHBA6NEL2 793 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 POTEB2H3BUK9 544 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 CHMLP26374 656 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 CST5P28325 142 aaPredicted RBP19.99■□□□□ 0.79
LRRC28-210ENST00000558879 ADCYAP1R1P41586 468 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 ACVR2BQ13705 512 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 CCDC178Q5BJE1 867 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 RNF180Q86T96 592 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 IQCA1Q86XH1 822 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 GPCPD1Q9NPB8 672 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 FAM184BQ9ULE4 1060 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 WDR19Q8NEZ3 1342 aa19.99■□□□□ 0.79
LRRC28-210ENST00000558879 DUSP11O75319 330 aaKnown RBP19.98■□□□□ 0.79
LRRC28-210ENST00000558879 GPATCH4Q5T3I0 446 aaKnown RBP19.98■□□□□ 0.79
LRRC28-210ENST00000558879 CCSAPQ6IQ19 270 aaPredicted RBP19.98■□□□□ 0.79
LRRC28-210ENST00000558879 ENAHQ8N8S7 591 aaPredicted RBP19.98■□□□□ 0.79
LRRC28-210ENST00000558879 PNMA1Q8ND90 353 aa19.98■□□□□ 0.79
LRRC28-210ENST00000558879 KLHDC9Q8NEP7 349 aa19.98■□□□□ 0.79
LRRC28-210ENST00000558879 UPF3AQ9H1J1 476 aaKnown RBP19.98■□□□□ 0.79
LRRC28-210ENST00000558879 TNKSO95271 1327 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms