RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ZHX1Q9UKY1 873 aaPredicted RBP14.74□□□□□ -0.05
SMAD3-208ENST00000558827 SYNPO2Q9UMS6 1093 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 FRMPD3Q5JV73 1810 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 ZMYM6O95789 1325 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 MCM3APO60318 1980 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 SEPT4O43236 478 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 PGK1P00558 417 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 NOVP48745 357 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 IMMTQ16891 758 aaKnown RBP14.73□□□□□ -0.05
SMAD3-208ENST00000558827 SYDE2Q5VT97 1194 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 DSCC1Q9BVC3 393 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 UBA5Q9GZZ9 404 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 TCP11L1Q9NUJ3 509 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 CCPG1Q9ULG6 757 aa14.73□□□□□ -0.05
SMAD3-208ENST00000558827 DNAJC25-GNG10A0A024R161 153 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 ATP2A1O14983 1001 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 SNAI1O95863 264 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-208ENST00000558827 ZNF865P0CJ78 1059 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-208ENST00000558827 PDHBP11177 359 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 COL6A1P12109 1028 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-208ENST00000558827 NSMFQ6X4W1 530 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 CHST13Q8NET6 341 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 FGD4Q96M96 766 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 ACAD9Q9H845 621 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 ZSWIM5Q9P217 1185 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 CTNNA3Q9UI47 895 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 TAF6LQ9Y6J9 622 aa14.72□□□□□ -0.05
SMAD3-208ENST00000558827 POTEB2H3BUK9 544 aa14.71□□□□□ -0.05
SMAD3-208ENST00000558827 MSCO60682 206 aa14.71□□□□□ -0.05
SMAD3-208ENST00000558827 CAPN2P17655 700 aa14.71□□□□□ -0.05
SMAD3-208ENST00000558827 ADCYAP1R1P41586 468 aa14.71□□□□□ -0.05
SMAD3-208ENST00000558827 OAZ1P54368 228 aa14.71□□□□□ -0.05
SMAD3-208ENST00000558827 LRRC41Q15345 812 aa14.71□□□□□ -0.05
SMAD3-208ENST00000558827 A1CFQ9NQ94 594 aaKnown RBP14.71□□□□□ -0.05
SMAD3-208ENST00000558827 FBXO40Q9UH90 709 aa14.71□□□□□ -0.05
SMAD3-208ENST00000558827 CNPY2Q9Y2B0 182 aa14.71□□□□□ -0.05
SMAD3-208ENST00000558827 DIS3Q9Y2L1 958 aaKnown RBP14.71□□□□□ -0.05
SMAD3-208ENST00000558827 SOWAHBA6NEL2 793 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 KBTBD13C9JR72 458 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 RARBP10826 455 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 PTGS1P23219 599 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 ZNF543Q08ER8 600 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 CYB5R4Q7L1T6 521 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 EEPD1Q7L9B9 569 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 ARRDC4Q8NCT1 418 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 RUFY2Q8WXA3 655 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 TTC14Q96N46 770 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 ZSCAN10Q96SZ4 725 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-208ENST00000558827 KAT14Q9H8E8 782 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 VAT1LQ9HCJ6 419 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 XPNPEP3Q9NQH7 507 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-208ENST00000558827 ATP11BQ9Y2G3 1177 aa14.7□□□□□ -0.06
SMAD3-208ENST00000558827 DNM1LO00429 736 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 PLA2G6O60733 806 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 SLC34A2O95436 690 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 FDX1P10109 184 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 PCP11498 1178 aaKnown RBP14.69□□□□□ -0.06
SMAD3-208ENST00000558827 ACVR2BQ13705 512 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 ARMCX2Q7L311 632 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 CHST3Q7LGC8 479 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 IQCA1Q86XH1 822 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 CCDC144CPQ8IYA2 1237 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 ENAHQ8N8S7 591 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-208ENST00000558827 PNMA1Q8ND90 353 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 RANBP17Q9H2T7 1088 aaKnown RBP14.69□□□□□ -0.06
SMAD3-208ENST00000558827 LAMA4Q16363 1823 aa14.69□□□□□ -0.06
SMAD3-208ENST00000558827 TNKSO95271 1327 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 NFIBO00712 420 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 ADCY6O43306 1168 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 ICAM1P05362 532 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 CYP21A2P08686 494 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 AKR1A1P14550 325 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 RTP1P59025 263 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 MDM2Q00987 491 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-208ENST00000558827 BAATQ14032 418 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-208ENST00000558827 USH1GQ495M9 461 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 BTNL9Q6UXG8 535 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 NOL8Q76FK4 1167 aaKnown RBP14.68□□□□□ -0.06
SMAD3-208ENST00000558827 FAM133AQ8N9E0 248 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 UBAC1Q9BSL1 405 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 KRT23Q9C075 422 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 FAM184BQ9ULE4 1060 aa14.68□□□□□ -0.06
SMAD3-208ENST00000558827 ASTN1O14525 1302 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 PTPDC1A2A3K4 754 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 MYADML2A6NDP7 307 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 SGSM2O43147 1006 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 DHX16O60231 1041 aaKnown RBP14.67□□□□□ -0.06
SMAD3-208ENST00000558827 CALML3P27482 149 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 MAGEA10P43363 369 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-208ENST00000558827 FXR1P51114 621 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMAD3-208ENST00000558827 TKFCQ3LXA3 575 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 TMEM63BQ5T3F8 832 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 MAMDC4Q6UXC1 1216 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 SLC39A5Q6ZMH5 540 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 DGKHQ86XP1 1220 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 SENP2Q9HC62 589 aa14.67□□□□□ -0.06
SMAD3-208ENST00000558827 CYP39A1Q9NYL5 469 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms